VIMSS1243539 has 220 amino acids
Query: PDH_N [M=154]
Accession: PF02153.21
Description: Prephenate dehydrogenase, nucleotide-binding domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.6e-18 51.7 0.0 5.6e-18 51.1 0.0 1.3 1 VIMSS1243539
Domain annotation for each sequence (and alignments):
>> VIMSS1243539
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 51.1 0.0 5.6e-18 5.6e-18 40 136 .. 43 130 .. 30 142 .. 0.88
Alignments for each domain:
== domain 1 score: 51.1 bits; conditional E-value: 5.6e-18
PDH_N 40 ieavkeadivllavPvevilevlkelaphlkedalitDvgsvKekvvkelekllkgksfvgghPmaGteksGvdaareelfenavviLtPtektdke 136
+++ + div+l+vP+ + e++k +p l+++ ++ D +s+K+++ + + ++ +vg hP++G+ ++ en+v + ++ +++dk
VIMSS1243539 43 EQKLANQDIVILSVPIYLTTEIIKRTIPYLSKGTILADYTSIKKEPLDCMLANYD-GPVVGLHPIFGP--------TISSPENQVIVVCDGKQQDKY 130
4788899***********************************************9.99**********........777788899999988888865 PP
Or compare VIMSS1243539 to CDD or PaperBLAST