VIMSS1244842 has 190 amino acids
Query: Cas_Cas4 [M=161]
Accession: PF01930.21
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.8e-16 44.9 0.5 1e-15 44.3 0.5 1.3 1 VIMSS1244842
Domain annotation for each sequence (and alignments):
>> VIMSS1244842
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 44.3 0.5 1e-15 1e-15 4 159 .. 14 187 .. 11 189 .. 0.79
Alignments for each domain:
== domain 1 score: 44.3 bits; conditional E-value: 1e-15
Cas_Cas4 4 kinyyliCkrklwlfsh.eitmeeeselvelGklihe........esykrek............keveise.......sikiDvvkkekeklvvvev 72
i+++ +C+r +++ + i++++ ++++G+ h+ + + +++ ++ +D+v +++++++vve+
VIMSS1244842 14 LIRQWCFCPRIVYYQELlAIKPNKP-LWIAQGEEFHKkveqlekrR-----SfsryglnnairhFNLS--IksqkyklHGIVDWVIETDTNVYVVEY 102
689999********99878888888.77888******665555552.....13444444466332333..134567779999*************** PP
Cas_Cas4 73 Kkskki.eeaaklQllyYlllLekkgieakGvleypkekkreevelteedreeleeaikeieeiissekppepkkkkiCkkCayaelC 159
K + + +klQ+++Y+ll+++ + + ++ + kk e+++t+e ++l ++i++i + ++s + p + + ++C+y+++C
VIMSS1244842 103 KTNPNPnSLGHKLQIAAYALLVQEYFAKPCKTTFLTSDKKSYEIKITDELINKLIKTISDILSTLDSGNKPDSSAS---EQCEYYNFC 187
*9866516688************999998888999999************99999999999999999988877766...578899999 PP
Or compare VIMSS1244842 to CDD or PaperBLAST