VIMSS125656 has 1257 amino acids
Query: Met_synt_B12 [M=273]
Accession: PF02965.22
Description: Vitamin B12 dependent methionine synthase, activation domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.9e-128 413.1 0.1 4.6e-128 412.4 0.1 1.3 1 VIMSS125656
Domain annotation for each sequence (and alignments):
>> VIMSS125656
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 412.4 0.1 4.6e-128 4.6e-128 1 272 [. 959 1230 .. 959 1231 .. 0.99
Alignments for each domain:
== domain 1 score: 412.4 bits; conditional E-value: 4.6e-128
Met_synt_B12 1 dleelveyidWtpffqawelkgkypkiledekvgeeakklfkdAqamLkkiieekllkakavvglfpansvgddievyadesrseelatlhtLrq 95
dl+el++yidWtpffq+welkg +pkil+de++g++a++lf+dAqam++ki++e ++ kav+g++pa s gdd+ ++ade r++elat+ tLrq
VIMSS125656 959 DLAELARYIDWTPFFQTWELKGVFPKILDDERQGAAARQLFEDAQAMVEKIVAEAWFAPKAVIGFWPAASMGDDVRLFADEVREAELATFFTLRQ 1053
699******************************************************************************************** PP
Met_synt_B12 96 qaekeegepnlclaDfvapkesgvkDyiGlfavtaglgieelakefeaeeDdYsailvkalaDrLaeAfaellhekvrkelWgyakdeklsneel 190
q+ k++g+pn++laDfvap++sg++Dy+G+f+vtag++ ++a++fe+++DdYs+i+vkalaDr+aeAfae++he vrkelWgya+de+++ +el
VIMSS125656 1054 QMVKRDGRPNVALADFVAPAASGKRDYVGGFVVTAGIEEVAIAERFERANDDYSSIMVKALADRFAEAFAERMHEYVRKELWGYAPDEAFTPQEL 1148
*********************************************************************************************** PP
Met_synt_B12 191 ikekYqGiRpApGYpacpdhsekktlfelldaeekigieLteslamtPaasvsGlyfahpeskyFavgkiekdqvedyakrk 272
i+e Y GiRpApGYpa+pdh+ek+tlf+lldae++ig++Ltes+am+P +svsGly++hp+s yF+v+kie+dqvedya+rk
VIMSS125656 1149 IAEPYAGIRPAPGYPAQPDHTEKETLFRLLDAEAAIGVRLTESYAMWPGSSVSGLYVGHPDSYYFGVAKIERDQVEDYADRK 1230
*********************************************************************************9 PP
Or compare VIMSS125656 to CDD or PaperBLAST