VIMSS127869 has 611 amino acids
Query: TIGR00110 [M=543]
Accession: TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8.5e-257 838.9 4.8 9.9e-257 838.7 4.8 1.0 1 VIMSS127869
Domain annotation for each sequence (and alignments):
>> VIMSS127869
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 838.7 4.8 9.9e-257 9.9e-257 2 541 .. 18 607 .. 17 609 .. 0.99
Alignments for each domain:
== domain 1 score: 838.7 bits; conditional E-value: 9.9e-257
TIGR00110 2 arallkatGlkdedlekPiiavvnsyteivPghvhlkdlaklvkeeieaaGgvakefntiavsDGiamgheGmkysLpsreiiaDsvetvvkahalDa 99
ar l++atG+kd d++kPiiavvns+t++vPghvhlkdl++lv++eieaaGgvakefntiav+DGiamgh+Gm+ysLpsreiiaDsve++v+ah++Da
VIMSS127869 18 ARGLWRATGMKDSDFGKPIIAVVNSFTQFVPGHVHLKDLGQLVAREIEAAGGVAKEFNTIAVDDGIAMGHDGMLYSLPSREIIADSVEYMVNAHCADA 115
689*********************************************************************************************** PP
TIGR00110 100 lvvissCDkivPGmlmaalrlniPaivvsGGpmeagktklsekidlvdvfeavgeyaagklseeeleeiersacPtagsCsGlftansmacltealGl 197
+v+is+CDki+PGml aa+rlniPa++vsGGpmeagk+ l k +d+++a++++a++k+s+e+++ iersacPt+gsCsG+ftansm+cltealGl
VIMSS127869 116 MVCISNCDKITPGMLNAAMRLNIPAVFVSGGPMEAGKVVLHGKTVALDLVDAMVAAADDKISDEDVKIIERSACPTCGSCSGMFTANSMNCLTEALGL 213
****************************************9********************************************************* PP
TIGR00110 198 slPgsstllatsaekkelakksgkrivelvkknik.......PrdiltkeafenaitldlalGGstntvLhllaiakeagvklslddfdrlsrkvPll 288
slPg++++lat++++k+l+ ++g+ iv+l +++++ Pr+i++k+afena++ld+a+GGstntvLh+la+a+e gv++ ++d+drlsrkvP+l
VIMSS127869 214 SLPGNGSTLATHSDRKRLFVEAGHLIVDLARRYYEqddetvlPRTIANKAAFENAMSLDIAMGGSTNTVLHILAAAHEGGVDFGMEDIDRLSRKVPCL 311
************************************************************************************************** PP
TIGR00110 289 aklkPsgkkv.iedlhraGGvsavlkeldkegllhkdaltvtGktlaetlekvkvlr...................................vdqdvi 350
+k++P+ + v +ed+hraGG++ +l+el++ gl+++d+ tv tl++ +++ +++r d+ vi
VIMSS127869 312 SKVAPAKQDVhMEDVHRAGGIMRILGELERGGLINRDTYTVHEATLGDAIDRWDITRtnsemvrqffkaapggvptqvafsqssrwddldtdSDNGVI 409
*******9999*********************************************99******************************99766667** PP
TIGR00110 351 rsldnpvkkegglavLkGnlaeeGavvkiagveedilkfeGpakvfeseeealeailggkvkeGdvvviryeGPkGgPGmremLaPtsalvglGLgkk 448
rs+++p++k+gglavL+Gn+a +G++vk+agv+e+ilkf+G+a v+es+++a+++ilg +vk+GdvvviryeGPkGgPGm+emL+Pts+l++ GLgk+
VIMSS127869 410 RSVEKPFSKDGGLAVLYGNIALDGCIVKTAGVDESILKFNGSAVVYESQDAAVKGILGNEVKAGDVVVIRYEGPKGGPGMQEMLYPTSYLKSKGLGKA 507
************************************************************************************************** PP
TIGR00110 449 vaLitDGrfsGgtrGlsiGhvsPeaaegGaialvedGDkikiDienrkldlevseeelaerrakakkkea.......revkgaLakyaklvssadkGa 539
+aLitDGrfsGgt+GlsiGh sPeaa+gGai+lv++GD i+iDi+nr+++l+vs++ela+rra++++k++ r+v aL++ya ++ssadkGa
VIMSS127869 508 CALITDGRFSGGTSGLSIGHASPEAAQGGAIGLVRQGDLIEIDIPNRTINLKVSDAELAARRAEQEEKGWkpeaprkRNVTTALKAYAAFASSADKGA 605
*********************************************************************9999**9999******************* PP
TIGR00110 540 vl 541
v+
VIMSS127869 606 VR 607
97 PP
Or compare VIMSS127869 to CDD or PaperBLAST