VIMSS1288693 has 118 amino acids
Query: DUF488 [M=121]
Accession: PF04343.17
Description: Protein of unknown function, DUF488
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1e-36 112.4 0.4 1.1e-36 112.3 0.4 1.0 1 VIMSS1288693
Domain annotation for each sequence (and alignments):
>> VIMSS1288693
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 112.3 0.4 1.1e-36 1.1e-36 2 121 .] 5 116 .. 4 116 .. 0.96
Alignments for each domain:
== domain 1 score: 112.3 bits; conditional E-value: 1.1e-36
DUF488 2 lerfyd.llkadgvrvlvDVRlwPrSrkpgfskealkedlkeagiaYvwlkelgpsrelrkwfkhdpk.weeffrrYaaeles.aaakealeelkel 95
+ r+yd + ++d +r+lvD R wPr g+sk +++ d wlk+++ps+elr+wf+hdpk + +f+++Y++el++ +a+k+a+e+lk++
VIMSS1288693 5 IGRIYDnKDNTDAIRILVD-RVWPR----GISKRTANLDY--------WLKDIAPSTELRQWFQHDPKlFGAFKEKYEKELRDqDAQKDAFEKLKDI 88
789****************.*****....***********........*******************66***************99*********** PP
DUF488 96 akkg..vtLlcaekdperchrrvlaeyl 121
++++ v Ll+a+kd+++++++vl+++l
VIMSS1288693 89 VNQHnhVLLLYAAKDTKHNQAVVLQQLL 116
*9888*******************9876 PP
Or compare VIMSS1288693 to CDD or PaperBLAST