VIMSS1290334 has 331 amino acids
Query: DUF4352 [M=125]
Accession: PF11611.12
Description: Domain of unknown function (DUF4352)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.4e-35 107.7 4.6 2.4e-35 107.7 4.6 2.4 2 VIMSS1290334
Domain annotation for each sequence (and alignments):
>> VIMSS1290334
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 107.7 4.6 2.4e-35 2.4e-35 1 124 [. 81 213 .. 81 214 .. 0.95
2 ? -2.3 5.2 0.28 0.28 22 82 .. 217 279 .. 209 293 .. 0.47
Alignments for each domain:
== domain 1 score: 107.7 bits; conditional E-value: 2.4e-35
DUF4352 1 skvgetvkvgdlevtvnsveytlsvgeneylqpdagneflivdvtvkNkgkealtvnssqfkLkdgdgkeydadlsasskadd.........lflgt 88
+k+getvk gdlevtvnsve+++svg + +a++ f+++dvt+kNkgkealt++ss+fkLk gd k+++ad ++s++a++ +fl++
VIMSS1290334 81 HKIGETVKNGDLEVTVNSVETMKSVG-PSLAPTNAKGIFVVADVTIKNKGKEALTIDSSMFKLKSGD-KTFEADNTGSMSANQsdngsiensFFLQR 175
68************************.99999**********************************9.*************9999************ PP
DUF4352 89 lnpgkevsGklvFevpkgkkk...yeLeystsisfsgka 124
+np+++ +Gk+vF+v+++ + +Le+ +s+ fs k+
VIMSS1290334 176 INPDSTAQGKIVFDVSENIANakdKKLEVISSL-FSVKK 213
****************9877666699***8888.99876 PP
== domain 2 score: -2.3 bits; conditional E-value: 0.28
DUF4352 22 tlsvgeneylqpdagn...eflivdvtvkNkgkealtvnssqfkLkdgdgkeydadlsasskad 82
+ls+ +++ ++++++ e+++++ + N ++ea ++ ++ d+d++ ++ ++++++k++
VIMSS1290334 217 DLSDA-KKTSKAKKDKqdtEVAVASSNSDNVSYEASATTPATTSSADTDSEDSEKSSKDEDKQN 279
33333.3444444444000444444444444444444445555555555555555555555554 PP
Or compare VIMSS1290334 to CDD or PaperBLAST