VIMSS13025 has 108 amino acids
Query: UPF0060 [M=107]
Accession: PF02694.19
Description: Uncharacterised BCR, YnfA/UPF0060 family
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8.5e-57 176.3 13.7 9.7e-57 176.1 13.7 1.0 1 VIMSS13025
Domain annotation for each sequence (and alignments):
>> VIMSS13025
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 176.1 13.7 9.7e-57 9.7e-57 1 107 [] 2 108 .] 2 108 .] 0.99
Alignments for each domain:
== domain 1 score: 176.1 bits; conditional E-value: 9.7e-57
UPF0060 1 vlrsillfllaalaeigGaylvwlwlreaksvllalvaaillavygflatlqpaafGrvyaayGGvfvvlallwglvvdgvkldlydwiGalialvGvl 99
+lrs+l+f++a+l+eigG+ylvwlw+re+ksv+lalv+aill+vygf+atlqpa+fGr+yaayGG+f++l+++wg++vd+v++d++dw+Ga+ialvGvl
VIMSS13025 2 ILRSLLYFVMAGLCEIGGGYLVWLWIREGKSVWLALVRAILLTVYGFVATLQPANFGRAYAAYGGIFIILSIIWGWQVDNVVVDRLDWLGAAIALVGVL 100
79************************************************************************************************* PP
UPF0060 100 vilyaprg 107
v++ya+r+
VIMSS13025 101 VMMYANRA 108
******96 PP
Or compare VIMSS13025 to CDD or PaperBLAST