VIMSS133227 has 232 amino acids
Query: LiaF-like_C [M=114]
Accession: PF09922.13
Description: Cell wall-active antibiotics response LiaF, C-terminal
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.4e-38 117.6 0.2 2e-38 117.1 0.2 1.2 1 VIMSS133227
Domain annotation for each sequence (and alignments):
>> VIMSS133227
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 117.1 0.2 2e-38 2e-38 1 114 [] 114 229 .. 114 229 .. 0.98
Alignments for each domain:
== domain 1 score: 117.1 bits; conditional E-value: 2e-38
LiaF-like_C 1 liGdqklgk..epyelediniqrviGdttiDLskavlpkgetvivirkliGdvkilVPedvevsveasvifGsvtvldekeagllnesvkleseeyee 96
++G+ ++ + ++++++din++r++G++ti+L++++l+++++vi++rk++G++ki+VP dvevs+++++++G++t++++ + l+ne+++ e+++y +
VIMSS133227 114 WFGNLHHFSsyQTCQFDDINLFRFMGKDTIHLERVILTNHDNVIILRKIVGTTKIIVPVDVEVSLSVNCLYGDLTFFNQPKRALRNEHYHQETKDYLK 211
8999999877899************************************************************************************* PP
LiaF-like_C 97 aerkvkiivslliGdveV 114
++++vki+++++iGdveV
VIMSS133227 212 SNKSVKIFLTTMIGDVEV 229
*****************9 PP
Or compare VIMSS133227 to CDD or PaperBLAST