VIMSS134685 has 680 amino acids
Query: DUF1430 [M=100]
Accession: PF07242.15
Description: Protein of unknown function (DUF1430)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.8e-32 97.3 1.2 2.8e-32 97.3 1.2 3.8 3 VIMSS134685
Domain annotation for each sequence (and alignments):
>> VIMSS134685
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -0.4 0.1 0.08 0.08 42 66 .. 8 32 .. 3 38 .. 0.65
2 ! 4.6 8.1 0.0022 0.0022 2 100 .] 164 279 .. 161 279 .. 0.67
3 ! 97.3 1.2 2.8e-32 2.8e-32 1 100 [] 580 679 .. 580 679 .. 0.99
Alignments for each domain:
== domain 1 score: -0.4 bits; conditional E-value: 0.08
DUF1430 42 eyliiqlavlllllvlifiltkeki 66
+++i+++++ l++v++++ ++e+i
VIMSS134685 8 LFILISMVLVSLYMVITSVDHREEI 32
4566666666677777766666655 PP
== domain 2 score: 4.6 bits; conditional E-value: 0.0022
DUF1430 2 lllalslllivllvllYFeqfkkkilikrifGyslf........krhkeyliiqlavlllllvlifiltk......ekii...llvvlvllliellli 82
l la+ ll +++l+l+Y + ++ i+ i+G slf + ++++ ++l+++ll+l+++ ++ + +i ll l l+ i+ ll+
VIMSS134685 164 LSLAIFLLTFMSLTLIYRIKSLRQAGIRLIAGESLFgvalrpvlEDVRQLICSVLVSSLLGLGILWYQGAlfmatvQLVIialLLYGLTLAGISTLLS 261
5677888899999999999999***********99844444433667888888888888888776443322211112222011233445556778888 PP
DUF1430 83 llvqekkekkkfisvlKG 100
++++ +++++++++lKG
VIMSS134685 262 VVYLLGLQENSLVDLLKG 279
888888888888888887 PP
== domain 3 score: 97.3 bits; conditional E-value: 2.8e-32
DUF1430 1 illlalslllivllvllYFeqfkkkilikrifGyslfkrhkeyliiqlavlllllvlifiltkekiillvvlvlllielllillvqekkekkkfisvl 98
il+l +++ll+ +++llYFeqf+++++ikr++G+++++ h +yl++q +vlll+lvl++ilt++ +i+ +v++l+++++llil++q+kke+ +++vl
VIMSS134685 580 ILTLSTAILLFDSMNLLYFEQFRRDLMIKRLAGMTIYELHGKYLLAQGGVLLLGLVLSSILTRDGLISALVVALFTLNALLILVRQDKKEEAGSMAVL 677
899*********************************************************************************************** PP
DUF1430 99 KG 100
KG
VIMSS134685 678 KG 679
*9 PP
Or compare VIMSS134685 to CDD or PaperBLAST