VIMSS13896 has 726 amino acids
Query: DUF3713 [M=1144]
Accession: PF12506.13
Description: Protein of unknown function (DUF3713)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.5e-110 356.1 72.1 3e-110 355.8 72.1 1.0 1 VIMSS13896
Domain annotation for each sequence (and alignments):
>> VIMSS13896
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 355.8 72.1 3e-110 3e-110 408 1144 .] 15 702 .. 4 702 .. 0.94
Alignments for each domain:
== domain 1 score: 355.8 bits; conditional E-value: 3e-110
DUF3713 408 kfifsRdkdGvhaigidggkyylk..........akgssrkkekqknfllfrnllaksnnskesnksfsfdlkeelktffkkNfdrllaeyllkkkn 494
++ ++R++ Gv+++g+dg+ + k +++++ +ke+qk+fl+fr+++ak ++ ++n++fsf l+e+lk +f+k+++++la++l+k +
VIMSS13896 15 GLRLVRNSVGVSVLGLDGFVKFIKggsggsnggsSSAKKIDKEEQKKFLKFRAFQAKIGTFYNTNFAFSFPLNETLKGWFDKHRGLILANALVKVT- 110
6789**************9777777*****999999999*********************************************************. PP
DUF3713 495 dnnsskkqklkfsesfkklkdllkklaklleklynaskikklrkklnskykerkstfssneknnkksnkknGLasplpYkdakegsynsesnyykql 591
+ ++k +++ + f+++k+ l ++ +++++s +++++k+ln+k+ er +++++n ++ + +++ nGL+++lpY+ +++g+y++++ny+++l
VIMSS13896 111 -LDTKEKASKALVDAFSSYKNWLSEYTPVGLATTMISFYFDQMKALNNKLLERVRSLNQNVNQANPTPWLNGLSAKLPYV-NTNGNYEKLNNYFTFL 205
.*******************************************************************************.**************** PP
DUF3713 592 lkksssekssktttnkseskn..kpkgsdtkdklselekkvnelvkklvkeklkskvassssfsniflsdyildnvleklaa.eklaldstlfsnkl 685
++k ++k ++++tn+se+k+ k+k++d+++ ++++ +++++++k++v + lk + a+ + +sn++l+++++d+v++ a+ + l + n+l
VIMSS13896 206 ITKVLWPKVGTEDTNVSEEKSklKTKTEDVNKIREKILNNIDSKLKTFVQK-LKPTLAPRPAYSNVILLNINNDKVWSAGANwSLAVLLDPKKVNPL 301
**************************************************5.*******************************777778888899** PP
DUF3713 686 knnilkdyfqnnnsfknfldlsakslk....nstsssssssnelkdllnnaiknyyflssflkltnkdlygfgsdkss..kekssqntsnekntksl 776
+ +lk+ f++n+ fk++++l+++ + ++++ s +++n+++d l+++i nyy+ +++ klt+k++yg+++d++ +k +++ s+++
VIMSS13896 302 SFMLLKQMFDQNSLFKKAKTLFENIQNkaktSGSGKSGTTTNDDADALSKVIGNYYY-NTWAKLTDKSIYGNLKDDKFddLFKLAFDSSINE----- 392
************8888887777776666778999999********************.5**************9998888999999999999..... PP
DUF3713 777 ntkeknlkllrnfylkdksyesssdeynnllrfLyTikyLlknnlkNlknlLksklsngsnaylvWsksinknkekkksssnnptssesqnknnifg 873
ks+++++++ ++++rf+yT+ +L+++nlkN+k+lLk +l++g+ +++ +++n+++++ +n++ ifg
VIMSS13896 393 -----------------KSFNVDYKAVIEHYRFIYTLEWLVDKNLKNFKDLLKANLKFGE---IAF------------IAYKNTETQNFSNPQGIFG 457
.................9999***************************************...666............5669*************** PP
DUF3713 874 sffdsnsndksnpllsnsssisksnekikseskstssvstksetssysnstve..nnktklyGFkGLitssssgslpselkeaiFkkfvknsenskk 968
s+f n+++++n +s+++ i+ + ++k+ +k+ ++++ +t+ ++++ n++t+ yGF+GL+tss ++l +++++ai+++++k
VIMSS13896 458 SYF--NYENETNAAKSATQIIDPNSFFYKTTTKPEAKTTQSANTAV-MVQNTQmnNQQTNSYGFTGLSTSS-GSMLGAATQQAILDQITK------- 543
***..999999999***********************555555555.55555559****************.******************....... PP
DUF3713 969 kgalyqfgskekLkeyidnikskseldelanlLksklkalsfsslannlasenslkekklsleekkealikqlkstnkesttsktkskqekdevfnr 1065
+l+q+gs ++Lk++i ++k++ ld++an+L l++ +++ + +k++ +++ ++ +++t +++++++ +v+++
VIMSS13896 544 -TSLQQYGSQADLKKIIGETKNQLLLDRIANQLIA---------LKP---------NTSGNSGTQKTIAAYFQTDAVGNPTLDFKAKQKLLLDVLDQ 621
.**********************************.........666.........7899999************************9999****** PP
DUF3713 1066 fsGyvgss......kgstgetskyltykdkddsekkygtyviQvnsnDvssleglkkllksllseelllnlvvqlAsnkevqeka 1144
+++++g++ ++ ++ t++ylty+d++d+ ++ ++ +++++ +ss++g+++ ++s+ ++++l++ +A k++q+ a
VIMSS13896 622 YKDFFGNNaqavqrDSGKSGTGNYLTYTDGSDKITYLQFSYKDIDGLSLSSSNGTSSKFASD----VVAALLLFQAAYKGTQQLA 702
************99999999******************************************....****************976 PP
Or compare VIMSS13896 to CDD or PaperBLAST