VIMSS140240 has 619 amino acids
Query: TIGR00110 [M=543]
Accession: TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8.3e-255 832.3 4.9 9.7e-255 832.1 4.9 1.0 1 VIMSS140240
Domain annotation for each sequence (and alignments):
>> VIMSS140240
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 832.1 4.9 9.7e-255 9.7e-255 2 542 .. 18 613 .. 17 614 .. 0.98
Alignments for each domain:
== domain 1 score: 832.1 bits; conditional E-value: 9.7e-255
TIGR00110 2 arallkatGlkdedlekPiiavvnsyteivPghvhlkdlaklvkeeieaaGgvakefntiavsDGiamgheGmkysLpsreiiaDsvetvvkahalDa 99
aral++atG+ + d++kPiiav+ns+t++vPghvhl+++++lv++eie+aG++akefntia++DGiamgh+Gm+ysLpsr++iaDs+e++v+ah++Da
VIMSS140240 18 ARALWRATGVMETDFGKPIIAVANSFTQFVPGHVHLHNMGQLVAREIEKAGAIAKEFNTIAIDDGIAMGHSGMLYSLPSRDLIADSIEYMVNAHCADA 115
79************************************************************************************************ PP
TIGR00110 100 lvvissCDkivPGmlmaalrlniPaivvsGGpmeagktklsekid...lvdvfeavgeyaagklseeeleeiersacPtagsCsGlftansmacltea 194
lv+is+CDki+PGml+aa+rlniP+i+vsGGpmeagk+ +i+ ++d+++a++e a++++s+ ++ee+e++acPt+gsCsG+ftansm+cltea
VIMSS140240 116 LVCISNCDKITPGMLIAAMRLNIPTIFVSGGPMEAGKVIGVANIQperRLDLIDAMIESADDNVSNRQVEEVEQNACPTCGSCSGMFTANSMNCLTEA 213
**************************************988887533389************************************************ PP
TIGR00110 195 lGlslPgsstllatsaekkelakksgkrivelvkknik.......PrdiltkeafenaitldlalGGstntvLhllaiakeagvklslddfdrlsrkv 285
lGlslPg+++ lat+a +kel+ ++g+ ive++k++++ Pr+i+tk+afena+t+d+a+GGstnt+Lhlla+a+eagv++++ d+drlsr v
VIMSS140240 214 LGLSLPGNGSYLATHAGRKELFLEAGRMIVEITKRYYEqndetvlPRSIATKKAFENAMTMDIAMGGSTNTILHLLAVANEAGVDFKMADIDRLSRVV 311
************************************************************************************************** PP
TIGR00110 286 PllaklkPsgkkv.iedlhraGGvsavlkeldkegllhkdaltvtGktlaetlekvkvlr...................................vdq 347
P+++k +P+ + + +ed+hraGG+ a+lkeldk+g+lh+d++t+ tl++ +e+ +v++ ++
VIMSS140240 312 PCICKTAPNNHDYyMEDVHRAGGIFAILKELDKAGKLHTDVHTIHAPTLKDAIEQWDVTNpentraierfkaapggvrttqafsqnrmwktldldREK 409
********987665********************************************999******************************9965566 PP
TIGR00110 348 dvirsldnpvkkegglavLkGnlaeeGavvkiagveedilkfeGpakvfeseeealeailggkvkeGdvvviryeGPkGgPGmremLaPtsalvglGL 445
+ir + ++++++gglavL+Gn+ae+G+vvk+agv+e+ilkf+G+a+vfes+e+a+e+ilg ++ +Gd+v+iryeGPkGgPGm+emL+Pts+l++ GL
VIMSS140240 410 GCIRDVAHAYSQDGGLAVLFGNIAERGCVVKTAGVDESILKFTGRARVFESQEDAVEGILGNQIVAGDIVIIRYEGPKGGPGMQEMLYPTSYLKSKGL 507
6************************************************************************************************* PP
TIGR00110 446 gkkvaLitDGrfsGgtrGlsiGhvsPeaaegGaialvedGDkikiDienrkldlevseeelaerrakakkkea.........revkgaLakyaklvss 534
gk++aL+tDGrfsGgt+GlsiGh sPeaaegGai+lv++GD+++iDi+nr ++l++s+eela+rra++++++ r+v+ aL++y+ +++s
VIMSS140240 508 GKACALLTDGRFSGGTSGLSIGHASPEAAEGGAIGLVHEGDTVEIDIPNRSIHLAISDEELAARRAEMEARGSkawkpknrdRYVSAALRAYGAMATS 605
*********************************************************************99999999***9***************** PP
TIGR00110 535 adkGavld 542
adkGav+d
VIMSS140240 606 ADKGAVRD 613
******97 PP
Or compare VIMSS140240 to CDD or PaperBLAST