VIMSS140426 has 516 amino acids
Query: DUF945 [M=459]
Accession: PF06097.15
Description: Bacterial protein of unknown function (DUF945)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.6e-112 360.7 3.4 8.7e-112 360.5 3.4 1.0 1 VIMSS140426
Domain annotation for each sequence (and alignments):
>> VIMSS140426
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 360.5 3.4 8.7e-112 8.7e-112 1 457 [. 1 498 [. 1 500 [. 0.97
Alignments for each domain:
== domain 1 score: 360.5 bits; conditional E-value: 8.7e-112
DUF945 1 MKKslvavgvvvalgaawtGaswytGkqaeqrldalvaqlneqlakalpeeglsYerGfFsStatyvlq..........aqgpdndeegqpvslvlds 88
MKK +++v++al+++ +G+++y+G +ae++l+++ + l+e+++++++++ +YerG+F+S++t+v++ + pdn ++ ++ ++l++
VIMSS140426 1 MKK--PLISVAAALLGVALGTPYYLGVKAEESLTQQQKILQETGFLTVESH--QYERGWFTSMETTVIRlkpellnnarKYLPDNLKTVLEQPVTLVN 94
9**..569999****************************************..********************************************* PP
DUF945 89 tidHGPlplsrkfnlipalAsvhtelendeatkklfeka.kgksPltidtrvgysGstsselslpafdyeedg.eklnfsGldlkvdlskdlkkvkle 184
+i+HGP++++ ++A+++te++ ++t+k +e++ +++ P ++ ++v ++Gs+++e+s+pafdyee +l+++Gl++++ ++k++k+++
VIMSS140426 95 HITHGPFAGGF-----GTQAYIETEFKYAPETEKVLERFfGKQVPASLANTVYFNGSGKMEVSVPAFDYEELSgIRLHWEGLTGETVYQKGFKSYRNG 187
***********.....*****************************************************55445************************ PP
DUF945 185 gdlpglqveaankeslelkgltldsdlkrgkeglylGdsslkidslsvssegke...............................gvelkglsldsds 251
d+p ++++ a+k++++++++++ds+++ g + l lG+s+l+++++s++++++ +e+ +l++++++
VIMSS140426 188 YDAPLFKIKLADKGDAAFEKVHFDSETSDGINPLALGSSNLTLEKFSLEWKEGVdynvklnelvnlvtdlqigafinpngsiapsKIEVGKLAFSTKT 285
******************************************************999999999999999988888888777665444*********** PP
DUF945 252 tedgdflnsqlkysldslkvngkdlgslqlklslnnLDaaalqalseayqqlqakalaakdpeelqealeealkaalpkLLkknPeleidplslknpk 349
e g f+ns++++++d+l ++++++g+l++++++++LDa+al l +++ q++ak+ +++e+ +++l +a+k ++++L+++nP+l i+ +++++p+
VIMSS140426 286 GESGAFINSEGQFRFDTLVYGDEKYGPLDIHIAAEHLDASALTVLKRKFAQISAKK---MTEEQIRNDLIAAVKGEASGLFTNNPVLDIKTFRFTLPS 380
********************************************************...789************************************ PP
DUF945 350 Gestlnlsldledsakddaenlaqllkkleldaklslpkamleelltqaaasqegad..........aedaekqakqqveellqmlqmqglltlegda 437
G++++ +++ ++d +k+d ++l +lkk+e+d+++s+p++mle+l+ ++a + ++++ +d++++ + +v++++q+++ +++ltl+gd+
VIMSS140426 381 GKIDVGGKIMFKDMKKEDLNQLGLMLKKTEADIRMSIPQKMLEDLAVSQAGNIFSVNaedeaegrasLDDINETLRLMVDSTVQSMAREKYLTLNGDQ 478
********************************************************9***************************************** PP
DUF945 438 iksslqyadGqvtlNGkkmp 457
i ++++++++q++lNGk+++
VIMSS140426 479 IDTAISLKNNQLKLNGKTLQ 498
*****************986 PP
Or compare VIMSS140426 to CDD or PaperBLAST