VIMSS143272 has 571 amino acids
Query: DUF262 [M=199]
Accession: PF03235.18
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.6e-43 133.0 0.2 7.6e-43 133.0 0.2 2.7 3 VIMSS143272
Domain annotation for each sequence (and alignments):
>> VIMSS143272
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 133.0 0.2 7.6e-43 7.6e-43 4 198 .. 14 242 .. 11 243 .. 0.70
2 ? 0.1 0.2 0.042 0.042 96 115 .. 305 324 .. 250 411 .. 0.63
3 ? -1.2 0.3 0.1 0.1 110 150 .. 516 558 .. 440 567 .. 0.56
Alignments for each domain:
== domain 1 score: 133.0 bits; conditional E-value: 7.6e-43
DUF262 4 llskkksg...fliPdyQRgyvWdeeqvedLiedike........lrgyplGsivlwkeaededgkyeviDGQQRltTltlllka............. 77
ll +++ + f+iP+yQR+y+Wd+e++ L++di + +++y+lG+iv+ +e+g++eviDGQQRlt+l+lll+a
VIMSS143272 14 LLGNQDMQekyFIIPEYQRPYRWDTEKCAVLWSDIVDfrqsstgkNEEYFLGTIVV---CPNEKGNLEVIDGQQRLTSLLLLLRAfyrvleqtestpd 108
666666666779********************************************...45669*********************8888766555555 PP
DUF262 78 ..........leed............ekekeeeeklkle.kreedkdffekllenekeelekleklkelngkkfkdlseeekseseknlikayelike 152
e +++ +l + +e+d++ ++++l n ++++e+ ++n+ +y ++ +
VIMSS143272 109 taakittlksK--IapciwdvdvltaEITDRTAIRLHTQvATETDNEILHEILANGEISEEC-----------------------RSNYAVNYLYFLK 181
55544443330..0233333444422222222222222234456666666666666666555.......................4444444444444 PP
DUF262 153 k.................ai.eklklveielddeddedeafeiFerlNsrGvpLsaadllkall 198
+ +i +++ l+ ie d+ ++ a +iF +lN+rG+pLs+ad++ka+l
VIMSS143272 182 QcqeyartnpmdwyhlclTIlNDCILLPIESDSLNS---ALTIFSTLNDRGLPLSDADIFKARL 242
44444444555555554436799*******999888...***********************98 PP
== domain 2 score: 0.1 bits; conditional E-value: 0.042
DUF262 96 reedkdffekllenekeele 115
+ e+++ f++l+e + + ++
VIMSS143272 305 QLENENLFNHLIELAGFWQD 324
12333333333333333332 PP
== domain 3 score: -1.2 bits; conditional E-value: 0.1
DUF262 110 ekeelek.leklkelngkkfkdl.seeekseseknlikayeli 150
++ ++++ + el g++ +d +++ ++++++ + ++ +++
VIMSS143272 516 KEQYQKSdIVEVRELAGENANDWlPSDIQKRQQQIVDRLKQFF 558
2222222233333333444333344444444444444444444 PP
Or compare VIMSS143272 to CDD or PaperBLAST