VIMSS143881 has 398 amino acids
Query: DUF898 [M=336]
Accession: PF05987.17
Description: Bacterial protein of unknown function (DUF898)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.3e-108 347.1 34.7 1.1e-107 346.0 34.7 1.5 1 VIMSS143881
Domain annotation for each sequence (and alignments):
>> VIMSS143881
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 346.0 34.7 1.1e-107 1.1e-107 2 335 .. 12 390 .. 11 391 .. 0.99
Alignments for each domain:
== domain 1 score: 346.0 bits; conditional E-value: 1.1e-107
DUF898 2 lrvaFtGsggeyfriwivNllLtivTLGiYsaWakvrtrrYfygnTrldgspfeYtatplellkGrlialvllvlyslasavspllalllllllllll 99
+rvaF+G+ggeyf+iw+vNllLti+TLG+YsaWa+vr+rrYfygnT+l+g++f+Y+a+p+e+lkGrl++++ ++l++++ a++p+l+ll++l+ll+l+
VIMSS143881 12 HRVAFKGEGGEYFSIWLVNLLLTIITLGVYSAWATVRRRRYFYGNTELNGDRFDYHAEPIEILKGRLMVIGGVILFYILLAIAPTLGLLVALVLLALI 109
79************************************************************************************************ PP
DUF898 100 pwlivrslrFrlrntsyrgirfgfdgslaeaykaflllpllalltlglll....................................Plaearqkrylv 161
pw+i+rs+r+++ +tsyrg+rf++++++++ay+a+l +pll +l l+ ++ ++++ q++++v
VIMSS143881 110 PWIIIRSWRYNAIMTSYRGVRFNYHCQTGQAYWALLFCPLLLILGLYAVIivmamflgsvastpstaitlivvsaillvpllavinGIVSTLQHSLYV 207
***********************************************9999*********************************************** PP
DUF898 162 nntryGterfsfeatagdfykafllalllfllglvlavlllvllaaalleakaleaaaeaka........lavllllalllllllllalayvkarlfn 251
nn+ +G+++f +++++++f+k+++ ++l+f+ ++++a++++++++a l++++ +++ a++++ +++ll+++l+lll++++++ y+ ++ +n
VIMSS143881 208 NNLYFGNSSFISTLKKSAFIKIAFFSVLIFIPFFFVAMMFAGAFFADLFQSALNGSIANENKtamliiqnASNLLFMMLMLLLGTMVSSSYRIVAQRN 305
*******************************************************99999999999999999999*********************** PP
DUF898 252 lvwnatslgg.arfssslrarrlvwlllsnllltlltLGlllpwakvrlaryllesltveaegdldevvaaeqqevsalGeelad 335
+++++t+l+g ++++ss++ ++++ll++n l+t+++LGl++p+a+vr+ary+++++++e++ +l +++a++++++sal+ee+++
VIMSS143881 306 YLFSQTTLQGdIKLRSSMKLLSYMGLLMTNSLITVCSLGLATPIAEVRHARYMANATEIEGDLSLLNIHAHQDTANSALAEEAVQ 390
**********************************************************************************997 PP
Or compare VIMSS143881 to CDD or PaperBLAST