VIMSS148539 has 247 amino acids
Query: DUF3053 [M=219]
Accession: PF11254.13
Description: Protein of unknown function (DUF3053)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.6e-81 257.0 1.9 8.6e-81 256.8 1.9 1.0 1 VIMSS148539
Domain annotation for each sequence (and alignments):
>> VIMSS148539
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 256.8 1.9 8.6e-81 8.6e-81 1 218 [. 12 240 .. 12 241 .. 0.99
Alignments for each domain:
== domain 1 score: 256.8 bits; conditional E-value: 8.6e-81
DUF3053 1 llvllvvllLagCgdkekeqRkAFiefLqntvirs.gvklptlteeqkkafGdyasdYav.ltafsqqlsqavdtslepvldavsrirvpqdyvtqrd 96
++v+lv+++L+gC++k++++R+AF+e+L++++i+s +v +++lt++q++afG+ya+dY+v lta++q+++++++t++e++++ v i++++d++++ +
VIMSS148539 12 VIVPLVIAMLTGCEGKGDSSRRAFVEYLNTQIITSpVVGVCELTPAQRQAFGHYADDYDVlLTAYGQIFAVVYETGQEDKITGV--IQSERDNLVFLN 107
6899********************************************************99**********************..************ PP
DUF3053 97 elrqaagalnllaqqlqnakaqadaaraaLkqpddlkvvydkaydktVtapanaltrvipaaeslveqlvqvgdflqkqgdqvefegngiqv...... 188
elr a++++n+++ +l+n++++++++++aLk+p+d+k+v+d+a++ktVt++++++tr+++++ ++++qlv++g+flqkqg++v+fe+ng++v
VIMSS148539 108 ELRVARDVNNRFILRLKNVSSENRKKYSALKLPADVKPVFDAAWNKTVTPLDETMTRYYFLRGKRLDQLVAMGEFLQKQGNKVRFETNGKAVfadlaa 205
************************************************************************************************** PP
DUF3053 189 ktpqqasqyNkllte.....Laeqqqellqaqksl 218
k+++q++q+N+++t+ L++q+ e++++q+++
VIMSS148539 206 KEHFQDQQFNFFITQndinhLTQQMVEFINSQQDA 240
**************99****************987 PP
Or compare VIMSS148539 to CDD or PaperBLAST