PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS149273 to PF10678 (DUF2492)

VIMSS149273 has 79 amino acids

Query:       DUF2492  [M=77]
Accession:   PF10678.13
Description: Protein of unknown function (DUF2492)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    3.4e-40  122.5   0.4    3.8e-40  122.4   0.4    1.0  1  VIMSS149273  


Domain annotation for each sequence (and alignments):
>> VIMSS149273  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  122.4   0.4   3.8e-40   3.8e-40       2      77 .]       3      78 ..       2      78 .. 0.99

  Alignments for each domain:
  == domain 1  score: 122.4 bits;  conditional E-value: 3.8e-40
      DUF2492  2 siHgHevlelllasgesltrasLkeaieekFGeearFhtCsaedltaeeLiefLlkkgKfiesedglttnaekiCn 77
                 siHgHevl+++++sge++t+ sL++ai+++FGe arFhtCsa+d+ta+eL++fL++kgKfi+ edg++t+++kiC+
  VIMSS149273  3 SIHGHEVLNMMIESGEQYTHTSLEAAIKARFGERARFHTCSASDMTAAELVAFLAAKGKFIAVEDGFSTHESKICR 78
                 8**************************************************************************6 PP



Or compare VIMSS149273 to CDD or PaperBLAST