VIMSS150402 has 335 amino acids
Query: DUF1202 [M=307]
Accession: PF06717.15
Description: Protein of unknown function (DUF1202)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.8e-202 656.3 10.7 4.4e-202 656.1 10.7 1.0 1 VIMSS150402
Domain annotation for each sequence (and alignments):
>> VIMSS150402
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 656.1 10.7 4.4e-202 4.4e-202 1 307 [] 14 320 .. 14 320 .. 1.00
Alignments for each domain:
== domain 1 score: 656.1 bits; conditional E-value: 4.4e-202
DUF1202 1 lisgyawaeveqpsenilkeqfkkqyhgilkldaitlknldakgnqatwsaegdvssredlytgvgqladyellektwtkdkpvkfsamltskgtpas 98
lisgy+waev+qps+nilkeqf+kqyhgilkld+itlknld++gnqatwsaegd+ssred+ytgvg++ady+++ektwtkd+pvkfsamltskgtpas
VIMSS150402 14 LISGYSWAEVAQPSDNILKEQFSKQYHGILKLDSITLKNLDSTGNQATWSAEGDISSREDMYTGVGMAADYYFVEKTWTKDRPVKFSAMLTSKGTPAS 111
79************************************************************************************************ PP
DUF1202 99 gwsvnyyslqaaasdrgrvvddiktndkylivnsedfnyrfsqleaalraqkasipalekelkaldkkivvakkeadaywgkdadgkqltreeafkki 196
gw+vnyyslq+aasd+gr++ddiktndkylivns+dfnyrf+++ea++raqkasip+le++l+aldkki+vakkeadaywgk+adgk+ltr+eafkk+
VIMSS150402 112 GWTVNYYSLQMAASDQGRAIDDIKTNDKYLIVNSDDFNYRFGNIEASWRAQKASIPGLEEQLSALDKKIAVAKKEADAYWGKGADGKPLTRAEAFKKT 209
************************************************************************************************** PP
DUF1202 197 lkerdeyvkandsevyavkyekevyqpaldacrkqseecyevaiqqkrdldineqrrqvflkseklrrklqddwvtlekgqypltikvsklqskkvdi 294
lkerd+yvkands+vya+kyekevyqpaldacrkqse+c+e+aiqqkrdldi+eqrrqvflkse+lrrk+q+dw+tlekgqypl+i+v+klq++++di
VIMSS150402 210 LKERDDYVKANDSSVYAEKYEKEVYQPALDACRKQSEPCNEAAIQQKRDLDIHEQRRQVFLKSEELRRKAQNDWITLEKGQYPLNIAVQKLQMQQSDI 307
************************************************************************************************** PP
DUF1202 295 lvkiddindayer 307
+vki+dind+yer
VIMSS150402 308 RVKIMDINDGYER 320
************8 PP
Or compare VIMSS150402 to CDD or PaperBLAST