VIMSS150404 has 239 amino acids
Query: DUF2884 [M=228]
Accession: PF11101.12
Description: Protein of unknown function (DUF2884)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.3e-23 69.9 0.1 1.5e-23 69.8 0.1 1.0 1 VIMSS150404
Domain annotation for each sequence (and alignments):
>> VIMSS150404
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 69.8 0.1 1.5e-23 1.5e-23 1 215 [. 24 234 .. 24 239 .] 0.95
Alignments for each domain:
== domain 1 score: 69.8 bits; conditional E-value: 1.5e-23
DUF2884 1 CevslnydvtveekklevsdagkekvrieedgqLfvdgkkvkLnadqqkaleqyseqvsqlvPevvalandgvklandavdevltsllgdaskafekl 98
C+v+ + dv +++++++v+ + + + +i+ dg+++ +gk+ +L+a q++ ++y++++++ +P + + a+ v+ a+d+++++ +g++s+ +++l
VIMSS150404 24 CSVTPRDDVILSPQTVQVKGE-NGNLVITPDGNVMYNGKQYTLSAAQREQAKDYQAELRSALPWIDEGARSRVEKGRVALDKIIAKEVGESSNMRSRL 120
9********************.667889999******************************************************************* PP
DUF2884 99 kekldevqakvkekfykdgdkfvlgadslskieeafdeefeqeieqlveesigsilaalgekmlegegdsmeeleqrmeklgekieekveeqakelek 196
++ ++++a+++ + + d ++++ + ++++ + ++ ++q++ + ++si ++ a +++l+g+g+ ++ ++ l++ i ++ ++q k +++
VIMSS150404 121 TKLDAQLKAQMNRIIEHRTDGLTFHYKAIDQVRADGQQLVNQAMGGILQDSINEMGA---KAVLKGGGNPLQGVMGSLGGLQTAIQNEWKNQEKDFQQ 215
*************************************************99998886...5789999999**************************** PP
DUF2884 197 kAdelCesleelaaleqqL 215
++++C+++ +l+ + ++L
VIMSS150404 216 FGKDVCSRVVTLEDSRKAL 234
**********999888777 PP
Or compare VIMSS150404 to CDD or PaperBLAST