PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS150447 to PF11115 (DUF2623)

VIMSS150447 has 95 amino acids

Query:       DUF2623  [M=93]
Accession:   PF11115.12
Description: Protein of unknown function (DUF2623)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.3e-51  158.2   2.4    2.5e-51  158.1   2.4    1.0  1  VIMSS150447  


Domain annotation for each sequence (and alignments):
>> VIMSS150447  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  158.1   2.4   2.5e-51   2.5e-51       1      92 [.       1      92 [.       1      93 [. 0.99

  Alignments for each domain:
  == domain 1  score: 158.1 bits;  conditional E-value: 2.5e-51
      DUF2623  1 menhfgkGllaGlkastadsaadiakycadykrGyvlGyahrlaekkGdrqlaafeaGlltrryGlerelvaeffkeqgspsalrfflaGyr 92
                 m+nhfgkGl+aGl+a +a sa ++ ++c++ykrG+vlG++hr++ek+Gdrql+a+eaG+ltrryGl++e+v++ffke+ s++a+rff+aGyr
  VIMSS150447  1 MNNHFGKGLMAGLHAPYAYSAHHAVNFCSEYKRGFVLGFTHRMFEKTGDRQLSAWEAGILTRRYGLDKEMVMDFFKENHSGMAVRFFMAGYR 92
                 9******************************************************************************************8 PP



Or compare VIMSS150447 to CDD or PaperBLAST