VIMSS150929 has 236 amino acids
Query: DUF3053 [M=219]
Accession: PF11254.12
Description: Protein of unknown function (DUF3053)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.1e-100 320.9 8.3 2.4e-100 320.7 8.3 1.0 1 VIMSS150929
Domain annotation for each sequence (and alignments):
>> VIMSS150929
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 320.7 8.3 2.4e-100 2.4e-100 1 218 [. 14 231 .. 14 232 .. 0.99
Alignments for each domain:
== domain 1 score: 320.7 bits; conditional E-value: 2.4e-100
DUF3053 1 lllllvvllLagCgdkepeqRkAFiafLqntviesgvkvpalteaqkkafGdyvsdYavltafsqqlsqavdtsleplldavsrirvvqdyvtrrdaL 98
+++ll+v++L+gC+dke +qRkAF++fLqnt+++sg+++p+lt++qkk+fG++vsdYa+l+++sqq++qa+d++l+p++d+v++irv+qdy+t+r+ L
VIMSS150929 14 VVALLMVFSLSGCFDKEGDQRKAFVDFLQNTAMRSGERLPTLTADQKKQFGPFVSDYAILYGYSQQVNQAMDSGLRPVVDSVNAIRVPQDYMTQREPL 111
689*********************************************************************************************** PP
DUF3053 99 rqaagalnelaqqlqnakaqadaaraaLkqpddlkavydkaydktVtapanalepvipaaesaledlvqvgdflqkqgdqvefegngiqvktpqqasq 196
rqa+g+l++laqqlqnak qadaa+ aLkq ddlk+v+d++y+k+Vt+pa+al+p+ipaa+ ++++lvqvgd++++qg+qv+f +ngiq++t+qqasq
VIMSS150929 112 RQANGSLGVLAQQLQNAKLQADAAHGALKQADDLKPVFDQVYKKVVTVPADALQPLIPAAQIFTQQLVQVGDYIAQQGEQVSFVANGIQFPTSQQASQ 209
************************************************************************************************** PP
DUF3053 197 yNklltaLneqqqellqaqksl 218
yN l+ +L++q+q+++qa++ +
VIMSS150929 210 YNALIGPLASQHQAFNQAWTAA 231
*******************865 PP
Or compare VIMSS150929 to CDD or PaperBLAST