PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS15283 to PF07166 (DUF1398)

VIMSS15283 has 134 amino acids

Query:       DUF1398  [M=119]
Accession:   PF07166.15
Description: Protein of unknown function (DUF1398)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence   Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      2e-51  159.3   0.7    2.3e-51  159.2   0.7    1.0  1  VIMSS15283  


Domain annotation for each sequence (and alignments):
>> VIMSS15283  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  159.2   0.7   2.3e-51   2.3e-51       1     118 [.       8     125 ..       8     126 .. 0.99

  Alignments for each domain:
  == domain 1  score: 159.2 bits;  conditional E-value: 2.3e-51
     DUF1398   1 kkafekvrsdadfpafiqelkrlgvshYeyfvatgnvkyvtendevvsvkakrellkvaekknaekikaalkkhqsgeitfeqfceelAkaGvfkWivd 99 
                 +k+fe+vr++++f++f++elk+++++hY+y++at+n++++t++d+v+ ++++r+llkv+++kn +kik+a+  h++g++tf+++c++lA aGvf+W++d
  VIMSS15283   8 QKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTRNLLKVSTTKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTD 106
                 79************************************************************************************************* PP

     DUF1398 100 lnektrsYydkdnslLlaE 118
                 +n+++rsYy++dn+lL++E
  VIMSS15283 107 VNHNKRSYYAIDNTLLYIE 125
                 ******************9 PP



Or compare VIMSS15283 to CDD or PaperBLAST