VIMSS153254 has 498 amino acids
Query: DUF935 [M=517]
Accession: PF06074.16
Description: Protein of unknown function (DUF935)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
9.5e-142 459.3 0.0 1.2e-141 459.1 0.0 1.0 1 VIMSS153254
Domain annotation for each sequence (and alignments):
>> VIMSS153254
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 459.1 0.0 1.2e-141 1.2e-141 35 517 .] 27 493 .. 15 493 .. 0.97
Alignments for each domain:
== domain 1 score: 459.1 bits; conditional E-value: 1.2e-141
DUF935 35 ehpssgLtparlarilreae.....qGd.ilaqleLaedmEekdahlaselstRkravlgldwevepasddaaeekladavrelledldnledllfdl 126
++s++++++ l+++l++++ qG i+ ++eL ++d+ +++++++Rk+a+++l+ ++e+ +a+++++ ++r++l dld ++++ ++
VIMSS153254 27 ASRSRAIDFYGLGMYLPNPDpilkaQGRdIRIYREL-----RTDPLVGGCIRRRKAALKSLERGLER---GHASARVFRFIRDMLDDLDL-SRIIGEM 115
5799***********************88*******.....**************************...88899**************9.******* PP
DUF935 127 lDAigkGfsvlEieWetsggewvpkalewrdprwfqfdredrnelrlrdateegeelppfkfvvhrhkaksglpiragllrvlaWpylfknyslkdwa 224
DA+++G++++Ei+W++s + w +++++ ++p+wfqfd+++ +++r rda+ ege l+p kfvv+ ++a +++p+++++l++++Wp+ fk++++k+w
VIMSS153254 116 SDAVLYGYQPCEIMWGRSVRAWAVTDIVGKPPEWFQFDTDNCLRFRARDAGVEGELLSPSKFVVPAQDASYDNPYGFPDLSMCFWPVAFKKGGMKFWL 213
************************************************************************************************** PP
DUF935 225 eFlEvYGlPlrlGkYpagAseeeketLlravasigsdAaaiiPesmeiefkeaak.agssdlfealaewcdkqiSkaiLGqTlTtdadggssnAlgkv 321
+F+E++G+P+++Gk+p+gA++ e+e+Ll++++++++dA+a+iP++++ie+k a a+ss++f +l++ +++iS+a+LGq++Tt+a +s++A++++
VIMSS153254 214 RFAEKFGSPWVIGKHPRGANDAEIEKLLDSMEQMVEDAVAAIPDDSSIELKAADGkADSSEVFRELITLSRSEISIALLGQNQTTEA--NSNKASAQA 309
*******************************************************9*******************************..89******* PP
DUF935 322 hneVreDirdaDakqlaatlnrdlirplvalNfgsqerlPrfefdveepeDlkalaealekLvklGlrvpasevrdklglpepekdeevlkaaaaaep 419
+ eV+ DirdaDa+ ++a++n ++ir +v lNfg + +P++ ++++e D + a+++ekL+++Glr+++++++++++l++ + de++ + e
VIMSS153254 310 GLEVTADIRDADADIIQAAVN-QVIRTVVTLNFG-DVPCPVWAMWEQETID-DTRATRDEKLTRAGLRLTPQYFKREYQLQDGDIDETPPS-----ER 399
*********************.************.****************.************************************999.....55 PP
DUF935 420 eaaaapaalaaaaalaaqaaaeaaeqdalDaladealaes..qaalepllapvlellqkaesleellarlaelypemdaeelaelLaralfvAdllGr 515
+++++p ++a+ + +a+ ++q++lD+++d +++ + +lep+lap++++++++ ++ ell +laelyp+m++++l+e+Lar+lfvA+++Gr
VIMSS153254 400 QNNMLPLSFAE------AIDADIQAQQQLDDALDILMNGGvlNGTLEPVLAPLFKRVENGVNPTELLGELAELYPQMNTDDLQERLARILFVANIWGR 491
55566644555......669999**************99999******************************************************** PP
DUF935 516 le 517
l+
VIMSS153254 492 LH 493
86 PP
Or compare VIMSS153254 to CDD or PaperBLAST