VIMSS15439 has 301 amino acids
Query: DUF481 [M=210]
Accession: PF04338.16
Description: Protein of unknown function, DUF481
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.5e-12 32.8 1.1 3.5e-12 32.8 1.1 2.0 2 VIMSS15439
Domain annotation for each sequence (and alignments):
>> VIMSS15439
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 32.8 1.1 3.5e-12 3.5e-12 93 196 .. 95 205 .. 94 212 .. 0.85
2 ? -1.1 0.1 0.087 0.087 103 135 .. 268 299 .. 255 301 .] 0.57
Alignments for each domain:
== domain 1 score: 32.8 bits; conditional E-value: 3.5e-12
DUF481 93 GyqlidtdktklsleaGpgyryekftdgpedeeeviarasl..dyeykisdnlkftqelealv.....nleggsnttlrsetgltakltdalalkisye 184
yq++++d++++ l +G +++ d+p +++ + r+++ d++ k++d+l+f+ +l++++ n +g ++t++++etgl++ +++ +al+++y
VIMSS15439 95 HYQFLENDDFSFGLTGGFRNYGYHYVDEPGKDTANMQRWKIapDWDVKLTDDLRFNGWLSMYKfandlNTTGYADTRVETETGLQYTFNETVALRVNYY 193
59*****************99999****99999999999883345779*************8633333667889999*********************9 PP
DUF481 185 vdydskppegkk 196
++ +++++++
VIMSS15439 194 LERGFNMDDSRN 205
988777777655 PP
== domain 2 score: -1.1 bits; conditional E-value: 0.087
DUF481 103 klsleaGpgyryekftdgpedeeeviarasldy 135
ls+ + +++++++ ++g +++++ a ++++y
VIMSS15439 268 GLSVSLEYAFEWQDHDEG-DSDKFHYAGVGVNY 299
355555555555555555.55555555555555 PP
Or compare VIMSS15439 to CDD or PaperBLAST