VIMSS156538 has 553 amino acids
Query: DUF262 [M=199]
Accession: PF03235.18
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.3e-41 129.0 8.1 1.3e-41 129.0 8.1 2.9 2 VIMSS156538
Domain annotation for each sequence (and alignments):
>> VIMSS156538
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 129.0 8.1 1.3e-41 1.3e-41 11 199 .] 18 239 .. 8 239 .. 0.76
2 ? -6.6 9.0 1 1 83 127 .. 385 430 .. 248 545 .. 0.65
Alignments for each domain:
== domain 1 score: 129.0 bits; conditional E-value: 1.3e-41
DUF262 11 g.fliPdyQRgyvWdeeqvedLiedike.....lrgyplGsivlwkeaededgkyeviDGQQRltTltlllka....................leed. 81
+ ++iP+yQR+y+W+e + edL+ d+ + +++++G+iv+ ++++++ + +iDGQQR++T +++l+a d
VIMSS156538 18 NiYKIPNYQREYSWEETELEDLWMDLSQiingeTESHFFGQIVI--HVDKKEKAKLIIDGQQRTSTAVIFLAAmrelftemynagwddaqfdaQ--Di 111
239***********************99****99**********..67777**********************888877765555554443330..03 PP
DUF262 82 .....ekekeeeeklklekreedkdffekllenekeelekleklkelngkkfkdlseeekseseknlikayelikek..................... 153
++ + +++ kl e dk++f++ +++ + e++ l ++ ++s+k+++ ay+++++k
VIMSS156538 112 ttkfiGRYTQTRDERKLILGENDKSYFSNRIQSVSSEQLGL----------------QKATKSQKRINFAYNYFYKKleeeinssdfledkygllktf 193
33444555556666666667777777777777777666654................44466666666666666666666666667666667766665 PP
DUF262 154 ..ai.eklklveielddeddedeafeiFerlNsrGvpLsaadllkalll 199
++ ek++++++e+dd+++ af iFe+lN+rG+ L++adllk++l+
VIMSS156538 194 fsTFtEKCSVMFVETDDFNE---AFIIFETLNARGKDLETADLLKNHLF 239
654589*********98888...************************97 PP
== domain 2 score: -6.6 bits; conditional E-value: 1
DUF262 83 kekeeeeklklekreedkdffekllenekeelek.leklkelngkk 127
k+++e +k+ ++ ++e + ++++++ +++ + + l++++++k
VIMSS156538 385 KYETEFSKIAFKIYQEEVESVTEIINLIRTNIIAdDVFLNNFSSFK 430
4444444444444444444444444444444333222222222211 PP
Or compare VIMSS156538 to CDD or PaperBLAST