VIMSS157019 has 233 amino acids
Query: DUF554 [M=220]
Accession: PF04474.17
Description: Protein of unknown function (DUF554)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.8e-79 251.7 25.1 3.1e-79 251.5 25.1 1.0 1 VIMSS157019
Domain annotation for each sequence (and alignments):
>> VIMSS157019
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 251.5 25.1 3.1e-79 3.1e-79 1 219 [. 4 227 .. 4 228 .. 0.96
Alignments for each domain:
== domain 1 score: 251.5 bits; conditional E-value: 3.1e-79
DUF554 1 lGtivnalailvGsllGlllkkrlperlketlmqalGlvvlliGismalksknlllvilslvlGgliGelldlekrlerlgeklkkklkkkk..efae 96
lG++vn l il+Gs++G+ l++ +per+k+t+m+++Gl+v+++Gi+ma+k++n l+vils+++G++iGe+l+++ +l++lg+++++k+++k+ ++++
VIMSS157019 4 LGALVNGLGILIGSVIGMKLHN-IPERMKDTVMKGMGLSVIVLGIQMAFKTSNSLIVILSICFGAVIGEWLNIDYHLNQLGHWIERKVGAKGksNVSK 100
699*****************98.*****************************************************************9555589*** PP
DUF554 97 gfvtasllfcvGamailGsleeGltgdatiLltksiLDgvtaiilastlGigvlfsalpvlvyqglltllAsllspllteev....iaelsavGglli 190
gfvta+l+f++Gam+i+G+l++G++g++++L+tks++Dg++a++l++tlG+gv++sa+pv++++g+++l+A+++++++ +++ i+el+a+Gg++i
VIMSS157019 101 GFVTATLIFVIGAMGIIGALDSGIRGNHDVLYTKSVMDGFIALLLSTTLGWGVMLSAIPVFLFEGIIALFATQINQFVPADLmaliIKELTATGGIMI 198
******************************************************************************8776556699********** PP
DUF554 191 laiGlnlleikkikvanllPalllavllv 219
laiGlnll+++ki+vanl+P +l+++l+v
VIMSS157019 199 LAIGLNLLGLTKIRVANLVPGILVVALIV 227
************************99886 PP
Or compare VIMSS157019 to CDD or PaperBLAST