PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS15938 to PF06173 (DUF986)

VIMSS15938 has 152 amino acids

Query:       DUF986  [M=148]
Accession:   PF06173.18
Description: Protein of unknown function (DUF986)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence   Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.4e-68  215.8   6.2    1.6e-68  215.6   6.2    1.0  1  VIMSS15938  


Domain annotation for each sequence (and alignments):
>> VIMSS15938  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  215.6   6.2   1.6e-68   1.6e-68       1     147 [.       4     150 ..       4     151 .. 0.99

  Alignments for each domain:
  == domain 1  score: 215.6 bits;  conditional E-value: 1.6e-68
      DUF986   1 tdilLvllivllllyaiydefildrlkgktrLkvkLkrrerlDalifilliviiiyqnvtsegsslttyLLlvlillaiYiafiRspkllfkekGfffa 99 
                 td++L+l+i++ll++aiyd+fi++r++g t L+++L rr+r+D++if++livi+iy+nvt++g+ +tt+LL++l+l+ +Yi++iR pk++fk+kGfffa
  VIMSS15938   4 TDLVLILFIAALLAFAIYDQFIMPRRNGPTLLAIPLLRRGRIDSVIFVGLIVILIYNNVTNHGALITTWLLSALALMGFYIFWIRVPKIIFKQKGFFFA 102
                 799************************************************************************************************ PP

      DUF986 100 nlfieydkikemnlsedgilvidlenkrllirvkkeddlekilkflie 147
                 n++iey++ik+mnlsedg+lv++le++rllirv+++ddleki+k+l++
  VIMSS15938 103 NVWIEYSRIKAMNLSEDGVLVMQLEQRRLLIRVRNIDDLEKIYKLLVS 150
                 *********************************************985 PP



Or compare VIMSS15938 to CDD or PaperBLAST