VIMSS16261 has 385 amino acids
Query: DUF418 [M=163]
Accession: PF04235.18
Description: Protein of unknown function (DUF418)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.3e-50 157.6 16.2 1.3e-50 157.6 16.2 2.2 2 VIMSS16261
Domain annotation for each sequence (and alignments):
>> VIMSS16261
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -1.2 0.5 0.094 0.094 24 36 .. 66 78 .. 45 137 .. 0.49
2 ! 157.6 16.2 1.3e-50 1.3e-50 1 162 [. 215 374 .. 215 375 .. 0.99
Alignments for each domain:
== domain 1 score: -1.2 bits; conditional E-value: 0.094
DUF418 24 glavglplallla 36
+l++g+ l++ll
VIMSS16261 66 ALLFGAGLQMLLP 78
2222222222222 PP
== domain 2 score: 157.6 bits; conditional E-value: 1.3e-50
DUF418 1 lgrkgllkegekhkrllkrllliglavglplallla.llallgeessllslllevlsmlgglalalgyvalillllkkekrarllrplaavGRmALTnY 98
l+r+g+lk g+ + r+++r+ ++++a+g++++l+++ l+++l++ +++ + ll++ ++l+++++a+gy++l++ ++++ +r +l+ ++a vGRmALTnY
VIMSS16261 215 LMRSGWLK-GQFSLRHYRRTGFVLVAIGVTINLPAIaLQWQLDWAYRWCAFLLQMPRELSAPFQAIGYASLFYGFWPQLSRFKLVLAIACVGRMALTNY 312
69******.****************************************************************************************** PP
DUF418 99 llqslvctlifygyglglfgslgraallllallifalqlllSklWlrrfrqGPlEwlwRkltyg 162
llq+l+ct++f y lglf +++r++ll++++ ++++++l+S +Wlr+frqGP+EwlwR+lt +
VIMSS16261 313 LLQTLICTTLF--YHLGLFMHFDRLELLAFVIPVWLANILFSVIWLRYFRQGPVEWLWRQLTLR 374
***********..99**********************************************975 PP
Or compare VIMSS16261 to CDD or PaperBLAST