VIMSS165124 has 563 amino acids
Query: TIGR00110 [M=543]
Accession: TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
9.1e-251 819.0 9.3 1e-250 818.8 9.3 1.0 1 VIMSS165124
Domain annotation for each sequence (and alignments):
>> VIMSS165124
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 818.8 9.3 1e-250 1e-250 1 542 [. 18 557 .. 18 558 .. 0.99
Alignments for each domain:
== domain 1 score: 818.8 bits; conditional E-value: 1e-250
TIGR00110 1 aarallkatGlkdedlekPiiavvnsyteivPghvhlkdlaklvkeeieaaGgvakefntiavsDGiamgheGmkysLpsreiiaDsvetvvkahalD 98
++ra+l+a+G++d+d++k i++v+n+y++i+P+++ +++la++++++i++aG++++ f+ti++sDGi+mg+eGmkysL+sre+iaDs+etv++++ lD
VIMSS165124 18 PNRAMLRAVGFQDADFTKAIVGVANGYSTITPCNMGINQLAQRAEAGINTAGAKPQIFGTITISDGISMGTEGMKYSLVSREVIADSIETVCNGQSLD 115
68************************************************************************************************ PP
TIGR00110 99 alvvissCDkivPGmlmaalrlniPaivvsGGpmeagktklsekidlvdvfeavgeyaagklseeeleeiersacPtagsCsGlftansmacltealG 196
++++i+ CDk++PG+++a +r+niPai+v+GG++++g+++ ++++++v+ feavgey+agk++e+el ++er+acP+agsC+G++tan+m++++ealG
VIMSS165124 116 GVIAIGGCDKNMPGAMIAIARINIPAIFVYGGTIKPGHYN-GKDLTVVSSFEAVGEYSAGKIDENELLAVERNACPGAGSCGGMYTANTMSSAFEALG 212
****************************************.9******************************************************** PP
TIGR00110 197 lslPgsstllatsaekkelakksgkrivelvkknikPrdiltkeafenaitldlalGGstntvLhllaiakeagvklslddfdrlsrkvPllaklkPs 294
+slP+sst++a + ek++++++s+k +ve++++++ Pr+i+t++++enai++++a+GGstn+vLh laia+ agv+l+lddf++++ +vP+l++lkPs
VIMSS165124 213 MSLPYSSTMAAEDDEKADSTEESAKVLVEAIRHQLLPRQIITRKSIENAISVIMAVGGSTNAVLHFLAIARAAGVELNLDDFETIRGRVPVLCDLKPS 310
************************************************************************************************** PP
TIGR00110 295 gkkviedlhraGGvsavlkeldkegllhkdaltvtGktlaetlekvkvlrv.dqdvirsldnpvkkegglavLkGnlaeeGavvkiagveedilkfeG 391
g++v +dlh+aGG+++v+k+l +gllh d++t+tGkt+ae+l++++ + +qdvir+++np++++g+la+LkGnla+eGav+ki+gv++ +++G
VIMSS165124 311 GRYVATDLHKAGGIPQVMKMLLVHGLLHGDCMTITGKTIAEVLADIPEEPSpNQDVIRPWNNPMYAQGHLAILKGNLATEGAVAKITGVKN--PVITG 406
**********************************************998753899************************************..999** PP
TIGR00110 392 pakvfeseeealeailggkvkeGdvvviryeGPkGgPGmremLaPtsalvglGLgkkvaLitDGrfsGgtrGlsiGhvsPeaaegGaialvedGDkik 489
pakvfesee++l+ail+gk+k+Gdv+viryeGPkGgPGmremLaPtsa++g+GLg++v+LitDGrfsGgt+G+++Ghv+Peaa+gGaialv++GD i+
VIMSS165124 407 PAKVFESEEDCLDAILAGKIKAGDVIVIRYEGPKGGPGMREMLAPTSAIIGAGLGDSVGLITDGRFSGGTYGMVVGHVAPEAAVGGAIALVQEGDSIT 504
************************************************************************************************** PP
TIGR00110 490 iDienrkldlevseeelaerrakakkkearevkgaLakyaklvssadkGavld 542
iD+++r l+l++s+eel +rra+++++ +r++ g+Lakyaklv+s++ Gav+d
VIMSS165124 505 IDAHARSLQLNISDEELTRRRANWQPRPPRYTTGILAKYAKLVASSSVGAVTD 557
***************************************************87 PP
Or compare VIMSS165124 to CDD or PaperBLAST