VIMSS16674 has 245 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.8e-10 26.9 0.0 2.4e-10 26.5 0.0 1.2 1 VIMSS16674
Domain annotation for each sequence (and alignments):
>> VIMSS16674
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 26.5 0.0 2.4e-10 2.4e-10 72 145 .. 65 142 .. 27 187 .. 0.76
Alignments for each domain:
== domain 1 score: 26.5 bits; conditional E-value: 2.4e-10
UPF0020 72 earaelklygsDldrrvvqgareNaekagvgdliefsqadaakLr.lkegevdvivtnpPY...GerlgskkalekLY 145
++ + + + +++l +++ ++a+eN ++ ++++i++ +ad+++ +++ +d+i++npPY G ++ ++ ++ Y
VIMSS16674 65 RTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTADIQQWItQQTVRFDLIISNPPYyqqGVECSTPQREQARY 142
3345666899*******************************996647777***********55555555555555544 PP
Or compare VIMSS16674 to CDD or PaperBLAST