VIMSS17045 has 235 amino acids
Query: DUF554 [M=220]
Accession: PF04474.17
Description: Protein of unknown function (DUF554)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.8e-71 226.2 18.9 2.1e-71 226.0 18.9 1.0 1 VIMSS17045
Domain annotation for each sequence (and alignments):
>> VIMSS17045
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 226.0 18.9 2.1e-71 2.1e-71 1 219 [. 3 227 .. 3 228 .. 0.98
Alignments for each domain:
== domain 1 score: 226.0 bits; conditional E-value: 2.1e-71
DUF554 1 lGtivnalailvGsllGlllkkrlperlketlmqalGlvvlliGismalksknlllvilslvlGgliGelldlekrlerlgeklkkklkkkk......e 93
+G ++na a+l+G++lG+ll++rlper++ ++++++Gl++l iGi ++k +nl++++l+ +lG+liGe++ lek ++++++k+++ +++++ +
VIMSS17045 3 IGPFINASAVLLGGVLGALLSQRLPERIRVSMTSIFGLASLGIGILLVVKCANLPAMVLATLLGALIGEICLLEKGVNTAVAKAQNLFRHSRkkpaheS 101
699*************************************************************************************9666689**99 PP
DUF554 94 faegfvtasllfcvGamailGsleeGltgdatiLltksiLDgvtaiilastlGigvlfsalpvlvyqglltllAsllspllteeviaelsavGgllila 192
f++++v++++lfc+++++i+G+++eG+tgd++iL++ks+LD++ta+i+a++lGi+v ++++p+l++q +l+ +A+l+ pl+t++++a++savGgll+la
VIMSS17045 102 FIQNYVAIIVLFCASGTGIFGAMNEGMTGDPSILIAKSFLDFFTAMIFACSLGIAVSVISIPLLIIQLTLAWAAALILPLTTPSMMADFSAVGGLLLLA 200
*************************************************************************************************** PP
DUF554 193 iGlnlleikkikvanllPalllavllv 219
+Gl++++ik ++v+n+lPallla++l+
VIMSS17045 201 TGLRICGIKMFPVVNMLPALLLAMPLS 227
************************986 PP
Or compare VIMSS17045 to CDD or PaperBLAST