PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS1748994 to PF04239 (DUF421)

VIMSS1748994 has 179 amino acids

Query:       DUF421  [M=135]
Accession:   PF04239.16
Description: YetF C-terminal domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    9.6e-16   43.7   0.0    1.3e-15   43.3   0.0    1.1  1  VIMSS1748994  


Domain annotation for each sequence (and alignments):
>> VIMSS1748994  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.3   0.0   1.3e-15   1.3e-15       7      76 ..      97     164 ..      93     174 .. 0.92

  Alignments for each domain:
  == domain 1  score: 43.3 bits;  conditional E-value: 1.3e-15
        DUF421   7 rrlidgkpivliknGkileenlkkarlsiddLlsqLRqqgifsisdVeyailEtnGqlsvlkkkekkpvt 76 
                    rlid   ivli++G++   nl++ +l++ d++  LR++g  + + V  ailE+ G +s+l  ++  pv+
  VIMSS1748994  97 CRLIDPPLIVLIREGEVSRRNLRRGGLTVADIEAVLREHGHPNAEGVHLAILEAKGAISILDRTD--PVE 164
                   58999999*****************************************************9998..655 PP



Or compare VIMSS1748994 to CDD or PaperBLAST