VIMSS17549 has 540 amino acids
Query: DUF4049 [M=333]
Accession: PF13258.10
Description: Domain of unknown function (DUF4049)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.4e-184 597.5 4.7 5e-184 596.9 4.7 1.2 1 VIMSS17549
Domain annotation for each sequence (and alignments):
>> VIMSS17549
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 596.9 4.7 5e-184 5e-184 1 333 [] 194 503 .. 194 503 .. 1.00
Alignments for each domain:
== domain 1 score: 596.9 bits; conditional E-value: 5e-184
DUF4049 1 tsartayfGdtdGrvGavlyallvsGhlGirekGesllsellkieeevlsvlkrknfneqlntnvnkvlydllnrrdiileelqqylvlkddavtpcif 99
ts+r++yfGdtdG+vGavl+al+++GhlGi+++Ge++ls+ll+ie+evl+vl+r+nfneqlntnvn+++ ++lnrrdiile+lq+ylv+++davtpc+f
VIMSS17549 194 TSTRPTYFGDTDGSVGAVLFALFATGHLGIMAEGENFLSQLLNIEDEVLNVLLRENFNEQLNTNVNTII-SILNRRDIILESLQPYLVINKDAVTPCTF 291
689******************************************************************.***************************** PP
DUF4049 100 lGdqtGdrfstifGdkyildllkrirsmegnkdsrinknvvvlaGnheinfnGnytarlarmklldedtyslikdldvcfydskrkvlashhGiirdee 198
lGdqtGdrfs+i+Gd++i+dllkri+s in+nv+vlaGnhe+n+nGny+++++rmk+ldedtys+ikd++vcfyd+k+k++a+hhGi++d++
VIMSS17549 292 LGDQTGDRFSNICGDQFIIDLLKRIMS--------INENVHVLAGNHETNCNGNYMQNFTRMKPLDEDTYSGIKDYPVCFYDPKYKIMANHHGITFDDQ 382
***************************........**************************************************************** PP
DUF4049 199 kkryilGaltvsidemknaldpvelaaiinkkhkeiiddkkfkliraislkstpvyaryfdvstdyrpkleallicsetlkgedpskyirqkvahnGnG 297
+kryi+G++tvsidem+naldpvelaaiinkkh++ii++kkfk++rais++s ++ryf+vstdyrpkleall+cs++l+ i+q+vahnGnG
VIMSS17549 383 RKRYIIGPITVSIDEMTNALDPVELAAIINKKHHAIINGKKFKTSRAISCRS---FNRYFSVSTDYRPKLEALLACSQMLG-------INQVVAHNGNG 471
****************************************************...**************************.......*********** PP
DUF4049 298 vderiqedntvlGlnslkeardkknkiiyssglscf 333
++eri+e++tvlGln ard+k++++++s+++c+
VIMSS17549 472 GRERIGETGTVLGLN----ARDSKHAGRMFSMHNCQ 503
***************....****************7 PP
Or compare VIMSS17549 to CDD or PaperBLAST