VIMSS17614 has 236 amino acids
Query: DUF3053 [M=219]
Accession: PF11254.12
Description: Protein of unknown function (DUF3053)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.6e-102 326.4 5.0 5.3e-102 326.2 5.0 1.0 1 VIMSS17614
Domain annotation for each sequence (and alignments):
>> VIMSS17614
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 326.2 5.0 5.3e-102 5.3e-102 2 218 .. 15 231 .. 14 232 .. 0.99
Alignments for each domain:
== domain 1 score: 326.2 bits; conditional E-value: 5.3e-102
DUF3053 2 llllvvllLagCgdkepeqRkAFiafLqntviesgvkvpalteaqkkafGdyvsdYavltafsqqlsqavdtsleplldavsrirvvqdyvtrrdaLrq 100
++ll+v++L+gC+dke +qRkAFi+fLqntv++sg+++p+lt++qkk+fG++vsdYa+l+++sqq++qa+d++l+p++d+v++irv+qdyvt++ Lr+
VIMSS17614 15 AALLMVVSLSGCFDKEGDQRKAFIDFLQNTVMRSGERLPTLTADQKKQFGPFVSDYAILYGYSQQVNQAMDSGLRPVVDSVNAIRVPQDYVTQSGPLRE 113
79************************************************************************************************* PP
DUF3053 101 aagalnelaqqlqnakaqadaaraaLkqpddlkavydkaydktVtapanalepvipaaesaledlvqvgdflqkqgdqvefegngiqvktpqqasqyNk 199
++g+l++laqqlqnak qadaa++aLkq+ddlk+v+d+a++k+Vt+pa+al+p+ipaa++++++lv+vgd++++qg+qv+f +ngiq++t+qqas+yNk
VIMSS17614 114 MNGSLGVLAQQLQNAKLQADAAHSALKQSDDLKPVFDQAFTKVVTTPADALQPLIPAAQTFTQQLVMVGDYIAQQGTQVSFVANGIQFPTSQQASEYNK 212
*************************************************************************************************** PP
DUF3053 200 lltaLneqqqellqaqksl 218
l+++L++q+q+++qa++++
VIMSS17614 213 LIAPLPAQHQAFNQAWTTA 231
****************976 PP
Or compare VIMSS17614 to CDD or PaperBLAST