VIMSS17614 has 236 amino acids
Query: DUF3053 [M=219]
Accession: PF11254.13
Description: Protein of unknown function (DUF3053)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1e-104 335.0 5.2 1.2e-104 334.8 5.2 1.0 1 VIMSS17614
Domain annotation for each sequence (and alignments):
>> VIMSS17614
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 334.8 5.2 1.2e-104 1.2e-104 1 218 [. 14 231 .. 14 232 .. 0.99
Alignments for each domain:
== domain 1 score: 334.8 bits; conditional E-value: 1.2e-104
DUF3053 1 llvllvvllLagCgdkekeqRkAFiefLqntvirsgvklptlteeqkkafGdyasdYavltafsqqlsqavdtslepvldavsrirvpqdyvtqrdelr 99
l++ll+v++L+gC+dke +qRkAFi+fLqntv+rsg++lptlt++qkk+fG+++sdYa+l+++sqq++qa+d++l+pv+d+v++irvpqdyvtq+ lr
VIMSS17614 14 LAALLMVVSLSGCFDKEGDQRKAFIDFLQNTVMRSGERLPTLTADQKKQFGPFVSDYAILYGYSQQVNQAMDSGLRPVVDSVNAIRVPQDYVTQSGPLR 112
579************************************************************************************************ PP
DUF3053 100 qaagalnllaqqlqnakaqadaaraaLkqpddlkvvydkaydktVtapanaltrvipaaeslveqlvqvgdflqkqgdqvefegngiqvktpqqasqyN 198
+++g+l++laqqlqnak qadaa++aLkq+ddlk+v+d+a++k+Vt+pa+al+++ipaa+++++qlv+vgd++++qg+qv+f +ngiq++t+qqas+yN
VIMSS17614 113 EMNGSLGVLAQQLQNAKLQADAAHSALKQSDDLKPVFDQAFTKVVTTPADALQPLIPAAQTFTQQLVMVGDYIAQQGTQVSFVANGIQFPTSQQASEYN 211
*************************************************************************************************** PP
DUF3053 199 kllteLaeqqqellqaqksl 218
kl+++L++q+q+++qa++++
VIMSS17614 212 KLIAPLPAQHQAFNQAWTTA 231
*****************976 PP
Or compare VIMSS17614 to CDD or PaperBLAST