VIMSS17902 has 476 amino acids
Query: DUF945 [M=459]
Accession: PF06097.15
Description: Bacterial protein of unknown function (DUF945)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.1e-110 355.0 9.1 4.8e-110 354.8 9.1 1.0 1 VIMSS17902
Domain annotation for each sequence (and alignments):
>> VIMSS17902
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 354.8 9.1 4.8e-110 4.8e-110 3 458 .. 4 464 .. 2 465 .. 0.98
Alignments for each domain:
== domain 1 score: 354.8 bits; conditional E-value: 4.8e-110
DUF945 3 KslvavgvvvalgaawtGaswytGkqaeqrldalvaqlneqlakalpeegl.....sYerGfFsStatyvlq.aqgpdndeegqpvslvldstidHGPl 95
K a+gv+val+++w+G++wytG+q++ ++++++++n++ +k + ++ ++++GfF S+ +++++ ++g+++ + ++++++v+d +++HGPl
VIMSS17902 4 K--SATGVIVALAVIWGGGTWYTGTQIQPGVEKFIKDFNDAKKKGEHAYDMtlsyqNFDKGFFNSRFQMQMTfDNGAPDLNIKPGQKVVFDVDVEHGPL 100
5..689***********************************9999999999************************************************ PP
DUF945 96 plsr..kfnlipalAsvhtelendeatkklfekakgksPltidtrvgysGstsselslpafdyeedgeklnfsGldlkvdls.kdlkkvklegdlpglq 191
p++ ++n+ipalA ++ +l+n+e t++lf +ak+ksP++++ r++++Gs+s++l++++ +y +k++f ++++++ + + l+++++eg+++ ++
VIMSS17902 101 PITMlmHGNVIPALAAAKVNLVNNELTQPLFIAAKNKSPVEATLRFAFGGSFSTTLDVAPAEY----GKFSFGEGQFTFNGDgSSLSNLDIEGKVEDIV 195
***************************************************************....******************************** PP
DUF945 192 veaankeslelkgltldsdlkrgkeglylGdsslkidslsvssegkegvelkglsld..sdstedgdflnsqlkysldslkvngkdlgslqlklslnnL 288
++ ++++ k++t+ds ++ ++++ +G+s+ k++++++ ++g+++++++ + + d +d+d +n++l+y+ld+l ++++lgs++++l ++ +
VIMSS17902 196 LQLSPMNKVTAKSFTIDSLARLEEKKFPVGESESKFNQINIINHGEDVAQIDAFVAKtrLDRVKDKDYINVNLTYELDKLTKGNQQLGSGEWSLIAESI 294
****9*************************************************9998899999*********************************** PP
DUF945 289 Daaalqalseayqqlqakalaa.....kdpeelqealeealkaalpkLLkknPeleidplslknpkGestlnlsldledsakddaenlaqllkklelda 382
D +a+++++ +y+ ++k+laa +d+ +lqe +++++k++lp L k +P+++ +p+++kn+ Ge+++nl++++ ++++++++ ++ +k+ l++
VIMSS17902 295 DPSAVRQFIIQYNIAMQKQLAAhpelaNDEVALQEVNAALFKEYLPLLQKSEPTIK-QPVRWKNALGELNANLDISI-ADPAKSSSSTNKDIKS--LNF 389
**************************9999999**9*****************777.69******************.68999999********..*** PP
DUF945 383 klslpkamleelltqaaasqegadaedaekqakqqveellqmlqmqglltlegdaiksslqyadGqvtlNGkkmpl 458
+++lp +++e ++q+ + +eg+dae+a+kqa++q+++++ +qm++l+t ++++ +++l y G+v +NG++m++
VIMSS17902 390 DVKLPLNVVTETAKQL-NLSEGMDAEKAQKQADKQISGMMTLGQMFQLITIDNNTASLQLRYTPGKVVFNGQEMSE 464
****************.999******************************************************96 PP
Or compare VIMSS17902 to CDD or PaperBLAST