VIMSS1803203 has 355 amino acids
Query: DUF3048_C [M=114]
Accession: PF17479.6
Description: Protein of unknown function (DUF3048) C-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.9e-30 90.0 1.2 1.3e-29 89.1 1.2 1.4 1 VIMSS1803203
Domain annotation for each sequence (and alignments):
>> VIMSS1803203
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 89.1 1.2 1.3e-29 1.3e-29 6 112 .. 239 341 .. 233 343 .. 0.87
Alignments for each domain:
== domain 1 score: 89.1 bits; conditional E-value: 1.3e-29
DUF3048_C 6 ssnkevtftYdaedglYlryqdgephvdaetgeqlaakNvivleveehkvkddaggrleidltgsgkgylltnGkvieitWkkesedgptkyydadG 102
s++ + +Y+ dg Y++y+dge ++d++t + l++kN++v+ + +++ ++++++l+idltg+g+gy+++nG++ +i+W+ke+++++t++ ++dG
VIMSS1803203 239 SDY--YKTSYKYVDGFYEKYMDGELAIDKNTSSSLKFKNIVVQIT-DMSL-QSDNTHLDIDLTGTGEGYVFSNGRMEKIHWEKEDSNSKTTLKTEDG 331
333..45566667******************************88.5553.344559**************************************** PP
DUF3048_C 103 keiklnpGkt 112
++i+l +G+t
VIMSS1803203 332 TPIHLSRGNT 341
********99 PP
Or compare VIMSS1803203 to CDD or PaperBLAST