VIMSS18607 has 404 amino acids
Query: GmrSD_C [M=138]
Accession: PF07510.16
Description: GmrSD restriction endonucleases, C-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.9e-24 71.3 4.5 7.3e-24 70.4 4.5 1.5 1 VIMSS18607
Domain annotation for each sequence (and alignments):
>> VIMSS18607
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 70.4 4.5 7.3e-24 7.3e-24 4 138 .] 250 392 .. 247 392 .. 0.93
Alignments for each domain:
== domain 1 score: 70.4 bits; conditional E-value: 7.3e-24
GmrSD_C 4 ddefkrdltdkkfykksskklryillgrleedlyeedeikgsskket...iEHilPqslaekw......gageddeeereelvndlgNLtlltgslNsa 93
++++ ++++ ++ ++s++++yi+ ++ ++++ d +k ++k++ EHi P +l +++ + g++d+++ e+++++ gNL+ l++slN++
VIMSS18607 250 RNDIGLAFWQSVNNASNSSCFHYIFFEKNCQEMGLADLKKLIPRKQFsqeKEHIIPINLLKQEsnnkirDLGFEDKKDLEDYIDTYGNLISLEKSLNRK 348
5667778888888888999***********99998899999888888999***********999*********************************** PP
GmrSD_C 94 isnkdfleKrekyeksclyltrkladkdkwneeviearqeaLakv 138
+s+kd K+e y++s+++ +r++ d++++n++++ +r+e++ ++
VIMSS18607 349 ASDKDLYGKDEIYKSSEIPFNRRF-DTKNFNKKALVKRNEEMREW 392
************************.799**************986 PP
Or compare VIMSS18607 to CDD or PaperBLAST