VIMSS186677 has 164 amino acids
Query: DUF308 [M=73]
Accession: PF03729.17
Description: Short repeat of unknown function (DUF308)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.6e-27 81.9 39.1 6.9e-17 47.8 12.9 3.0 3 VIMSS186677
Domain annotation for each sequence (and alignments):
>> VIMSS186677
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 47.8 12.9 6.9e-17 6.9e-17 1 73 [] 11 78 .. 11 78 .. 0.91
2 ! 31.0 5.1 1.3e-11 1.3e-11 2 50 .. 65 113 .. 64 120 .. 0.92
3 ! 26.3 12.0 3.7e-10 3.7e-10 2 45 .. 120 163 .. 119 164 .] 0.95
Alignments for each domain:
== domain 1 score: 47.8 bits; conditional E-value: 6.9e-17
DUF308 1 llGilliilGilaliwPgaallalviliGvlllvsGivqlvaafaarkkegggfwllllsGilyiiaGllllf 73
l+Gil++i+Gil++i P+ +ll+++i+ G+l++ sGi+ ++ af +++++ g l+++ Gi+++++Gl+l+f
VIMSS186677 11 LEGILMAIVGILFFIKPMDSLLYFTIVAGILIIGSGIFTIIKAF--KSSRK-G--LYIFTGIISVLFGLMLCF 78
68******************************************..44334.3..778************986 PP
== domain 2 score: 31.0 bits; conditional E-value: 1.3e-11
DUF308 2 lGilliilGilaliwPgaallalviliGvlllvsGivqlvaafaarkke 50
+Gi+++++G+++ + P+ ++ +lvi+ G ++lv Gi+ lv+ f+ ++++
VIMSS186677 65 TGIISVLFGLMLCFVPLESIDVLVIFYGSWALVNGIFLLVGEFTYKSFG 113
7******************************************888754 PP
== domain 3 score: 26.3 bits; conditional E-value: 3.7e-10
DUF308 2 lGilliilGilaliwPgaallalviliGvlllvsGivqlvaafa 45
+illiilG+l+l+ P +l+a+ ++iGv++++ ++++++ +f+
VIMSS186677 120 YSILLIILGLLILFEPISFLIATPFIIGVYFIIIAVFEIYLGFK 163
58**************************************9995 PP
Or compare VIMSS186677 to CDD or PaperBLAST