VIMSS188126 has 380 amino acids
Query: DUF1297 [M=188]
Accession: PF06973.17
Description: Domain of unknown function (DUF1297)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.5e-86 273.7 0.0 4.9e-86 273.2 0.0 1.2 1 VIMSS188126
Domain annotation for each sequence (and alignments):
>> VIMSS188126
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 273.2 0.0 4.9e-86 4.9e-86 1 188 [] 189 380 .] 189 380 .] 0.99
Alignments for each domain:
== domain 1 score: 273.2 bits; conditional E-value: 4.9e-86
HHHHHHHHHHCTTSSSHHHHCCEEEEE---SEEEEEEEEEETTTTEEEEEEEEEEEEEECCCHCCS-HHHHHCCT-...---EEEEEEEEEEE-GGGH CS
DUF1297 1 dfkekleellekglieeedlkkasieeyvvGanfnlnyFysplkeevellgidrRyesnidglvrlpakqqlelel...epsyvvvGnipvvlREsll 95
+fkek+e+l++ g+i++edl+ka+ie+y++G fn+++Fysp++ee+ellgid+R+e+++dg+vrlpa qql+l + ep+y+v+G+ + +lREsll
VIMSS188126 189 EFKEKSEKLIRLGVITREDLEKARIERYIIGPVFNFDFFYSPIDEEIELLGIDWRFETSLDGHVRLPAAQQLTLPEwqfEPEYTVCGHASSTLRESLL 286
79**********************************************************************9987778******************* PP
HHHHHHHHHHHHHHHHHSTT---EEEEEEEEE-TTS-EEEEEEESSB-GGGGGGTT.--CCHHHTTSS---HHHHHHHHHHHHHHCT-GGGCEE CS
DUF1297 96 ekvfelgekfveaakklvppGiiGpfcLqsvvtedlelvvfevsaRivggtnvyme.gspyskllfgepmsmGrriarEikeaiekdrleevvt 188
ekvf+++ek+vea+kk++ppGiiGpf+Lq++v++dl++++++v++R++ggtn++m+ g+py + l+++pms+Grria+Eik+aie d+le+vvt
VIMSS188126 287 EKVFDMAEKYVEATKKYYPPGIIGPFTLQTAVDKDLNFYIYDVAPRTGGGTNIHMAmGHPYGNSLWRKPMSTGRRIALEIKRAIELDELEKVVT 380
*********************************************************************************************8 PP
Or compare VIMSS188126 to CDD or PaperBLAST