VIMSS188647 has 551 amino acids
Query: TIGR00110 [M=543]
Accession: TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.6e-252 824.1 0.8 2.9e-252 823.9 0.8 1.0 1 VIMSS188647
Domain annotation for each sequence (and alignments):
>> VIMSS188647
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 823.9 0.8 2.9e-252 2.9e-252 1 542 [. 14 550 .. 14 551 .] 0.99
Alignments for each domain:
== domain 1 score: 823.9 bits; conditional E-value: 2.9e-252
TIGR00110 1 aarallkatGlkdedlekPiiavvnsyteivPghvhlkdlaklvkeeieaaGgvakefntiavsDGiamgheGmkysLpsreiiaDsvetvvkahalD 98
++r+l+ka+G++de+le+P+i+v+ns++e++Pgh+hl+++a++vk++i+ aGg++ efnti+++DGiam+h GmkysLpsre+iaDsve v++ ++D
VIMSS188647 14 PHRSLFKAMGFTDEELERPLIGVANSFNELIPGHIHLRKIAEAVKAGIRMAGGTPLEFNTIGICDGIAMNHLGMKYSLPSRELIADSVELVARVYHFD 111
69************************************************************************************************ PP
TIGR00110 99 alvvissCDkivPGmlmaalrlniPaivvsGGpmeagktklsekidlvdvfeavgeyaagklseeeleeiersacPtagsCsGlftansmacltealG 196
++vvi+sCDki+PGmlma +rlniPai+vsGGpm +g++k +e +d++ vfeavg+++agk+s eel+ +e++acP++gsC+G+ftan+m++ltealG
VIMSS188647 112 GIVVIASCDKIIPGMLMAIARLNIPAIFVSGGPMLPGRFK-GEYVDVKTVFEAVGAVKAGKMSYEELKLLENFACPGCGSCAGMFTANTMNALTEALG 208
****************************************.9******************************************************** PP
TIGR00110 197 lslPgsstllatsaekkelakksgkrivelvkknikPrdiltkeafenaitldlalGGstntvLhllaiakeagvklslddfdrlsrkvPllaklkPs 294
+slP ++t++a a++ ++ak++g++iv+lv+k++k rdilt+eafe+ai++d+alGGstntvLhl+aia+ea+v+lsl+dfdr+s+k+P+lakl+P+
VIMSS188647 209 ISLPWNGTAPAPYAHRIRIAKETGMQIVKLVEKDVKARDILTREAFEDAIAVDMALGGSTNTVLHLMAIANEAKVDLSLEDFDRISEKTPTLAKLSPA 306
************************************************************************************************** PP
TIGR00110 295 gkkviedlhraGGvsavlkeldkegllhkdaltvtGktlaetlekvkvlrvdqdvirsldnpvkkegglavLkGnlaeeGavvkiagveedilkfeGp 392
gk++++dl +aGG+ +v+k l++ gl+h+d ltv+ kt++e l+++ v +dvir++ np++ gg+ +L+G la++Gav+k+++ve + +feGp
VIMSS188647 307 GKHFVVDLYEAGGILGVMKRLSELGLIHEDRLTVSLKTVGELLKSAFVS--RDDVIRPVTNPYHPRGGIMILRGTLAPNGAVIKVSAVEG-VEVFEGP 401
*********************************************9999..89***********************************99.******* PP
TIGR00110 393 akvfeseeealeailggkvkeGdvvviryeGPkGgPGmremLaPtsalvglGLgkkvaLitDGrfsGgtrGlsiGhvsPeaaegGaialvedGDkiki 490
akvf+seeea +ail+gk+++GdvvviryeGPkGgPGmremL+Ptsa++g+GL+k+vaL+tDGrfsG+trGls+GhvsPeaaegG+ialv+dGD+i+i
VIMSS188647 402 AKVFDSEEEATAAILSGKIERGDVVVIRYEGPKGGPGMREMLTPTSAIAGMGLDKDVALVTDGRFSGATRGLSVGHVSPEAAEGGPIALVKDGDIIRI 499
************************************************************************************************** PP
TIGR00110 491 DienrkldlevseeelaerrakakkkearevkgaLakyaklvssadkGavld 542
D++n+++dl v+eeel++rr+++k+k +e g+L++y+ lv+sa++Ga+l+
VIMSS188647 500 DLKNKRIDLLVDEEELRKRREEWKPKV-KELTGYLKRYSTLVTSANTGAILR 550
***********************9988.99*******************986 PP
Or compare VIMSS188647 to CDD or PaperBLAST