VIMSS18932 has 658 amino acids
Query: DUF262 [M=199]
Accession: PF03235.18
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8.7e-28 83.9 5.3 8.7e-28 83.9 5.3 4.6 4 VIMSS18932
Domain annotation for each sequence (and alignments):
>> VIMSS18932
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 83.9 5.3 8.7e-28 8.7e-28 39 198 .. 2 172 .. 1 173 [. 0.68
2 ? 1.5 2.0 0.015 0.015 94 171 .. 194 264 .. 175 276 .. 0.58
3 ? -4.1 5.9 0.77 0.77 133 166 .. 355 385 .. 322 478 .. 0.52
4 ? -7.1 15.3 1 1 81 182 .. 514 599 .. 423 612 .. 0.54
Alignments for each domain:
== domain 1 score: 83.9 bits; conditional E-value: 8.7e-28
DUF262 39 rgyplGsivlw.keaededgkyeviDGQQRltTltlllka............leedekekeeeeklklekreedkdffekllenekeelekleklkeln 124
+g+++Gsi+ + + ++ +++++ +iDGQQRltT+tlll a +++ ke+e++l +++++ dk+f l e++k++l++l+++++++
VIMSS18932 2 NGHFIGSILYVlDSNTHSNNTLLIIDGQQRLTTITLLLIAlrnhlseeveilE--KFSRKEIESYLINSNKDGDKKFRLILSESDKDTLLSLIDKNKRK 98
69********86555555**********************7776655443320..24444444444444555555555555555555555533333332 PP
DUF262 125 gkkfkdlseeekseseknlikayelikek..........ai...eklklveielddeddedeafeiFerlNsrGvpLsaadllkall 198
se ++++++el++++ ++ +kl +v+i+ld+ +d+ + iFe++Ns+ ++L+++dl+++++
VIMSS18932 99 -----------PSEPSVKIVENFELFEKWisentdkletIFkglKKLMIVWISLDK--GKDDPQLIFESMNSKDIELTQTDLIRNYI 172
...........255555666666666666666666666511455889********5..5669***********************97 PP
== domain 2 score: 1.5 bits; conditional E-value: 0.015
DUF262 94 ekreedkdffekllenekeelekleklkelngkkfkdlseeekseseknlikayelikekaieklklveielddedde 171
e+ e+++ f++++++ + ++ +++++++ + fkd+ +++ e e+ l+++ ++ ++ +i +++edd+
VIMSS18932 194 ERFEQNETLFNRFVRHYLTIKIGKIPNEKRVYEAFKDYRQKKGIEIEDLLKDLQKYCG-------YFCQIAFKKEDDK 264
3445666777777777777777766666666666666644444444444444444443.......3555555555554 PP
== domain 3 score: -4.1 bits; conditional E-value: 0.77
DUF262 133 eeekseseknlikayelikekaieklklveield 166
e+++ ++++++k++++i+ + k+k +++l+
VIMSS18932 355 EKQRFPNNDEFKKLFITIDFY---KFKKNKYFLE 385
333333333333333333321...1111111111 PP
== domain 4 score: -7.1 bits; conditional E-value: 1
DUF262 81 d..ekekeeeeklklekreedkdffekllenekeelekleklkelngkkfkdlseeekseseknlikayelikekaieklklveielddeddedeafei 177
+ +kek+e+e++kl+k+++ d ++ +++++ e l + +k k l+e+ +++++++i ay++ k+++v i+++ ++ ++
VIMSS18932 514 KkeKKEKKEKEEYKLKKEKKVYDLSSYKFSSDSRE------LFDILREKIKALDERITEKFNQKYI-AYKFC------KISFVDIVVQ-----EKGLKL 594
01122222222333332222222222222222222......2222222233332222222222222.22222......2344444444.....335666 PP
DUF262 178 FerlN 182
+ ++N
VIMSS18932 595 YLKMN 599
66665 PP
Or compare VIMSS18932 to CDD or PaperBLAST