PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS1901512 to PF09829 (DUF2057)

VIMSS1901512 has 233 amino acids

Query:       DUF2057  [M=192]
Accession:   PF09829.14
Description: Uncharacterized protein conserved in bacteria (DUF2057)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.4e-25   75.9   4.4      4e-25   75.2   4.4    1.3  1  VIMSS1901512  


Domain annotation for each sequence (and alignments):
>> VIMSS1901512  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   75.2   4.4     4e-25     4e-25       1     192 []      32     230 ..      32     230 .. 0.81

  Alignments for each domain:
  == domain 1  score: 75.2 bits;  conditional E-value: 4e-25
       DUF2057   1 tLtlpeevellavdgkkvksslfsga.ssleLtdGehqivvryeelvredsdsdshelvkSepvivtfdaeadqeltlklpklrn.areakafaksp 95 
                   tL + + +++ a++g+++ +sl+++  +s++L++G+h i  +y+ l+  d ++d+h++++S  v v  + +++q+++l++p+ ++ +++ak++a+ p
  VIMSS1901512  32 TLVVDDHIKVTAINGQELTQSLLQPLtKSFTLQPGKHVITAKYDRLY--DLRRDEHDYLRSGNVSVAAELADNQTYRLTMPNQPEdYAAAKKYAERP 126
                   788999*******************99********************..9999***************************987766999******** PP

       DUF2057  96 qikLtdksgksvavkqdklkkeglqigrnyekelaeynqsgaaa.........aavaaaaaaaaaaaaaaaqkaaasaqgeataeqmLqywyqqAdk 183
                   ++ ++  +++ +a ++++  ++  + +  +++    +  sg a           + + ++++++ ++ a+++++++++ + ++++q   ++++qA++
  VIMSS1901512 127 TLAIQS-NNTIIASQESVGGNSNSLFSGLGKALGGVFGGSGDAElqnqraiaaLDQPSVSTNKSVTTGATVTQTTSVNASTSSLDQ-FMQIWLQATP 221
                   *99998.6665555555555666666667777777777777777888877754333334445555555666666666666777777.77789***** PP

       DUF2057 184 etRkeFlaW 192
                   ++R++  +W
  VIMSS1901512 222 AEREKMRQW 230
                   *****9999 PP



Or compare VIMSS1901512 to CDD or PaperBLAST