VIMSS19045 has 681 amino acids
Query: DUF262 [M=199]
Accession: PF03235.18
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.6e-35 107.4 4.3 5.6e-35 107.4 4.3 2.4 2 VIMSS19045
Domain annotation for each sequence (and alignments):
>> VIMSS19045
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 107.4 4.3 5.6e-35 5.6e-35 10 199 .] 17 217 .. 8 217 .. 0.79
2 ? -0.7 0.2 0.072 0.072 125 166 .. 572 607 .. 516 622 .. 0.57
Alignments for each domain:
== domain 1 score: 107.4 bits; conditional E-value: 5.6e-35
DUF262 10 sgfliPdyQRgyvWdeeqvedLiedike....lrgyplGsivlw......keaede...dgkyeviDGQQRltTltlllka.........leed....e 82
f iP yQR+y W+e+++e+L++di + ++ +++Gsi ++ + +++ +iDGQQR+tTl+lllka + +
VIMSS19045 17 TIFSIPVYQRNYTWEEKNCEKLLQDIISisqnKKTHFMGSITYIlhwiddEK---SlrkLQEFVIIDGQQRITTLMLLLKAietkipneeV--KkeidN 110
3399***************************99*********9999976333...3346**********************6666655441..034447 PP
DUF262 83 kekeeeeklklekreedkdffekllenekeelekleklkelngkkfkdlseeekseseknlikayelikekaieklklveielddeddedeafeiFerl 181
+ +kl+l++ ++dk+ f+ +++n++ e + + + +++ k+l ++ ++ ++ ++y ++ +lk+v i l+ ed+ + +Fe++
VIMSS19045 111 LLNLSGQKLRLKPIKSDKEAFDLVMQNRSHEIQGVSHIRNNYKFFTKEL--DNHISKGYRIEEIYGAFL-----RLKIVAIGLE--LGEDDPQVVFESI 200
888899999********************99888544444445555555..333455556666666665.....5999****99..66779******** PP
DUF262 182 NsrGvpLsaadllkalll 199
N+ Gv+L+ dl++++l+
VIMSS19045 201 NA-GVQLKGLDLIRNYLM 217
*7.9***********985 PP
== domain 2 score: -0.7 bits; conditional E-value: 0.072
DUF262 125 gkkfkdlseeekseseknlikayelikekaieklklveield 166
++++ +l++ + ++++++ ++ + + + ++ + l+
VIMSS19045 572 DLTSHNLQSVKLPNHQRKIARNAKELAS------AVIDYLLE 607
3333333444445555555555555544......44444444 PP
Or compare VIMSS19045 to CDD or PaperBLAST