VIMSS1955895 has 573 amino acids
Query: DUF262 [M=199]
Accession: PF03235.18
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.4e-42 131.4 9.9 2.4e-42 131.4 9.9 3.7 3 VIMSS1955895
Domain annotation for each sequence (and alignments):
>> VIMSS1955895
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 131.4 9.9 2.4e-42 2.4e-42 2 198 .. 6 213 .. 5 214 .. 0.83
2 ? -2.1 7.2 0.19 0.19 99 178 .. 286 339 .. 239 390 .. 0.56
3 ? -6.6 11.9 1 1 84 179 .. 393 499 .. 366 571 .. 0.77
Alignments for each domain:
== domain 1 score: 131.4 bits; conditional E-value: 2.4e-42
DUF262 2 edllskkksgfliPdyQRgyvWdeeqvedLiedike.......lrgyplGsivlwkeaededgkyeviDGQQRltTltlllkalee...d.....ek 83
+++l+++ f+iP+yQR+y+W+e++ +dL+ed++e ++g++lG+iv+ ++++++ ++y++iDGQQR+tT+++l +al++ +
VIMSS1955895 6 KEVLNNSI--FFIPNYQRDYAWEEKNLDDLWEDLLEaeqavsdQMGHFLGTIVV-SKNSKNPEIYDIIDGQQRITTIFMLRYALNFrtqNsqrniVY 99
78888887..9*******************************************.667777******************999944343313445566 PP
DUF262 84 ekeeeeklklekreedkdffekllenekeelekleklkelngkkfkdlseeekseseknlikayelikek.............ai.eklklveield 166
+ +++++++l+ ++e+k ff+++l+++++++++ +l+++ +++ +++l+k++++i+++ i +++++++e +
VIMSS1955895 100 FCDDNDNFRLQVQDENKLFFNEVLKQAENNKIN------------IELENKAQTQGQQKLYKVFKAIWSYvaslesdkalklfNIiGNMSIMWLEEQ 184
667778888888888888888888888877666............456777889**************99***999999976633577777777776 PP
DUF262 167 deddedeafeiFerlNsrGvpLsaadllkall 198
d+ + a ++F+++N+rG+pL d+lk+ll
VIMSS1955895 185 DSGK---AIRMFQTVNDRGIPLLILDKLKSLL 213
6666...**********************998 PP
== domain 2 score: -2.1 bits; conditional E-value: 0.19
DUF262 99 dkdffekllenekeelekleklkelngkkfkdlseeekseseknlikayelikekaieklklveielddeddedeafeiF 178
+ + ++++l+n+++++e+ ++ +++ k l++ +e++ + l++++d+ e f+iF
VIMSS1955895 286 HYNELKRVLKNKDKTKEE---------------FKKWLDDYSKDLLQFFETFLK-----------ILEKTQDNIEMFKIF 339
222333333333333222...............122223333333333333333...........233334444444444 PP
== domain 3 score: -6.6 bits; conditional E-value: 1
DUF262 84 ekeeeeklklekreedkdffekllenekeelek.leklkelngkkfkdlseeekseseknlikayelikek............ai.eklklveield 166
e ++++k++ ++ ++++++ ++ +e+++ +++ ++gk+f l + ++ + ++ +li+ek i ++ l +++++
VIMSS1955895 393 VTESKDEFKNRIIDDCNKCIKRAGYYDINEFISeISEDNYEWGKYFHYL---FLTYNNVGIEECMKLIDEKiyaftiehiipqNIiNNGLLKNYKFE 486
4677888888889999999999999999999888888888888888888...335555555555555555555556666555533477777777777 PP
DUF262 167 deddedeafeiFe 179
+edd ++ ++ F
VIMSS1955895 487 NEDDFNKLKNTFG 499
7777777776665 PP
Or compare VIMSS1955895 to CDD or PaperBLAST