VIMSS197749 has 1176 amino acids
Query: Met_synt_B12 [M=273]
Accession: PF02965.21
Description: Vitamin B12 dependent methionine synthase, activation domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.3e-37 115.0 0.0 3.3e-37 114.4 0.0 1.2 1 VIMSS197749
Domain annotation for each sequence (and alignments):
>> VIMSS197749
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 114.4 0.0 3.3e-37 3.3e-37 3 257 .. 924 1176 .] 922 1176 .] 0.81
Alignments for each domain:
== domain 1 score: 114.4 bits; conditional E-value: 3.3e-37
Met_synt_B12 3 eelveyidWtpffq.aWelkgkypkiledekvge.eakklfkdAqamLkkiieekllkakavvglfpAnsegddievyadesrse......elat 89
+e+ y+d + + W++++ k ++ ++ + a+k++ +a ++i +e+ll+ + ++g fp++seg+ + +y+ +++ +a+
VIMSS197749 924 SEVFAYLDLQALIAgQWQFRKP--KDQDRATYDAfLAEKVYPILEAWKQRILAENLLHPELIYGYFPCQSEGNTVYIYDPLGDKDawvperAIAQ 1016
5666666666555425666544..3333333333367888888888889*****************************55444441221113444 PP
Met_synt_B12 90 lhtLrqqaekeegkpnlclaDfvapkesgvkDyiGlFavtaglgieelakefeaekddYsa.ilvkaladrLaeAfaellhekvrkelWgyakde 183
+++ rq+ g lc+aDf ap esg+ D++ + avt+g + ++a+e+ a+ ++Ys+ + + +a + aeA+ae+ h+++r+el g ++d
VIMSS197749 1017 FTFPRQK-----GGRRLCIADFFAPVESGIIDVFPMQAVTVGEIATQVAQELFAA-NQYSDyLYFHGMAVQTAEALAEWCHARIRREL-GCTPDP 1104
5555554.....6779**********************************99988.56655167899*******************95.777775 PP
Met_synt_B12 184 klsneelikekYqgiRpApGYpacpdhtekktlfelldaeekigieLteslamtPaasvsGlyfahpearyFav 257
s++++++++Yqg R+++GYpacp+ + + t +ll+ ++ +g+ + es ++P++s +++ hp a+yF+v
VIMSS197749 1105 -ESIRDILAQRYQGSRYSFGYPACPNMQDQYTQLRLLESDR-MGMYMDESEQLYPEQSTTAIICYHPTAKYFSV 1176
.47889*********************************99.******************************97 PP
Or compare VIMSS197749 to CDD or PaperBLAST