VIMSS197749 has 1176 amino acids
Query: Met_synt_B12 [M=273]
Accession: PF02965.22
Description: Vitamin B12 dependent methionine synthase, activation domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.6e-37 113.7 0.0 8.1e-37 113.2 0.0 1.3 1 VIMSS197749
Domain annotation for each sequence (and alignments):
>> VIMSS197749
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 113.2 0.0 8.1e-37 8.1e-37 4 257 .. 925 1176 .] 922 1176 .] 0.81
Alignments for each domain:
== domain 1 score: 113.2 bits; conditional E-value: 8.1e-37
Met_synt_B12 4 elveyidWtpffq.awelkgkypkiledekvge.eakklfkdAqamLkkiieekllkakavvglfpansvgddievyadesrse......elatl 90
e+ y+d + + w+++ k ++++++ + a+k++ +a ++i +e+ll+ + ++g fp++s+g+ + +y+ +++ +a++
VIMSS197749 925 EVFAYLDLQALIAgQWQFRKP--KDQDRATYDAfLAEKVYPILEAWKQRILAENLLHPELIYGYFPCQSEGNTVYIYDPLGDKDawvperAIAQF 1017
555666655554324666543..3333333333367888888888899*****************************554444412211134444 PP
Met_synt_B12 91 htLrqqaekeegepnlclaDfvapkesgvkDyiGlfavtaglgieelakefeaeeDdYsa.ilvkalaDrLaeAfaellhekvrkelWgyakdek 184
++ rq +g lc+aDf ap esg+ D++ + avt+g ++++a+e+ a+ ++Ys+ + ++ +a aeA+ae+ h+++r+el g ++d
VIMSS197749 1018 TFPRQ-----KGGRRLCIADFFAPVESGIIDVFPMQAVTVGEIATQVAQELFAA-NQYSDyLYFHGMAVQTAEALAEWCHARIRREL-GCTPDP- 1104
44444.....57789*********************************999888.56655177899*******************95.777776. PP
Met_synt_B12 185 lsneelikekYqGiRpApGYpacpdhsekktlfelldaeekigieLteslamtPaasvsGlyfahpeskyFav 257
s++++++++YqG R+++GYpacp+ + + t +ll+ ++ +g+ + es ++P++s +++ hp +kyF+v
VIMSS197749 1105 ESIRDILAQRYQGSRYSFGYPACPNMQDQYTQLRLLESDR-MGMYMDESEQLYPEQSTTAIICYHPTAKYFSV 1176
47889*********************************99.******************************97 PP
Or compare VIMSS197749 to CDD or PaperBLAST