VIMSS19807 has 288 amino acids
Query: GmrSD_C [M=138]
Accession: PF07510.16
Description: GmrSD restriction endonucleases, C-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.5e-20 59.7 2.1 1.7e-20 59.5 0.7 1.8 2 VIMSS19807
Domain annotation for each sequence (and alignments):
>> VIMSS19807
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -2.7 0.0 0.27 0.27 18 43 .. 46 71 .. 42 78 .. 0.61
2 ! 59.5 0.7 1.7e-20 1.7e-20 5 133 .. 137 287 .. 115 288 .] 0.78
Alignments for each domain:
== domain 1 score: -2.7 bits; conditional E-value: 0.27
GmrSD_C 18 kksskklryillgrleedlyeedeik 43
+k++++l++il + ++++++d ++
VIMSS19807 46 YKDDDYLHVILCASILHHYSDQDIET 71
45556777888777775555444444 PP
== domain 2 score: 59.5 bits; conditional E-value: 1.7e-20
GmrSD_C 5 defkrdltdkkfykkssk.klryillgrleedlyee.deikgs.skketiEHilPqslaekw.gageddeeereelvndlgNLtlltgslN....sais 95
+++ +++ + ++ +++ ++ il e+ ++++ ++ + ++ ++E ilPq+++ + ++++++eeer ++++l NLtll g++N s++
VIMSS19807 137 SNLYTKFYFINGKTAKKNsWVKPILI-LVEYFMSDNaNPACIKmDDDLHVERILPQNPDPSSqWMKDFSEEERGLYTHSLANLTLLGGKKNtkalSQAL 234
44445555555555555554455555.5555555554444444223333**********96669****************************9999999 PP
GmrSD_C 96 nkdfleKrekyek..............sclyltr.kladkdkwneeviearqe 133
n+df+eK+e y c+ +t+ ++ + +w+++++e+r+e
VIMSS19807 235 NQDFKEKKEIYMGktimldnkktfrvmTCYDMTKnDVCRYTEWTPTSLEKRKE 287
*********99887788888888888888888886777*************97 PP
Or compare VIMSS19807 to CDD or PaperBLAST