VIMSS19820 has 578 amino acids
Query: GmrSD_C [M=138]
Accession: PF07510.16
Description: GmrSD restriction endonucleases, C-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.1e-27 82.8 4.6 1.1e-27 82.8 4.6 2.5 2 VIMSS19820
Domain annotation for each sequence (and alignments):
>> VIMSS19820
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -0.8 2.1 0.073 0.073 6 55 .. 149 199 .. 104 199 .. 0.64
2 ! 82.8 4.6 1.1e-27 1.1e-27 50 135 .. 452 554 .. 400 557 .. 0.82
Alignments for each domain:
== domain 1 score: -0.8 bits; conditional E-value: 0.073
GmrSD_C 6 efkrdltdkkfykksskklryillgrleedlyeedeikgsskket.iEHil 55
++k+ +kkf++++ + +y +++ l+e+ + + ++ ++ ++ +EHi+
VIMSS19820 149 NIKKSELNKKFEENTYLRNAYYFKELLNESVENGSISDIDDFVKWfYEHIV 199
444444455555544434455555444433333344444433332688886 PP
== domain 2 score: 82.8 bits; conditional E-value: 1.1e-27
GmrSD_C 50 t........iEHilPqslaekw.gageddeeereelvndlgNLtlltgslNsaisnkdfleKrekyek.......sclyltrkla.dkdkwneeviear 131
+ +EHilPq+++ ++ ++ ++d+e+ree+vn++ NLtll++++N ++ n df+eKr+ y sc+ +t++l+ ++ kwne+++++r
VIMSS19820 452 FiamdaetqVEHILPQTPKRGSqWNADFDKEKREEWVNNIANLTLLKRKKNAHALNGDFDEKRKIYGGkdtskviSCYDITKELYsNYRKWNEKSLQER 550
233344455***********777*******************************************9999**************99************* PP
GmrSD_C 132 qeaL 135
+ L
VIMSS19820 551 YKSL 554
9987 PP
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