VIMSS200213 has 1244 amino acids
Query: Met_synt_B12 [M=273]
Accession: PF02965.22
Description: Vitamin B12 dependent methionine synthase, activation domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6e-133 428.4 0.0 9.2e-133 427.8 0.0 1.3 1 VIMSS200213
Domain annotation for each sequence (and alignments):
>> VIMSS200213
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 427.8 0.0 9.2e-133 9.2e-133 2 273 .] 954 1225 .. 953 1225 .. 0.99
Alignments for each domain:
== domain 1 score: 427.8 bits; conditional E-value: 9.2e-133
Met_synt_B12 2 leelveyidWtpffqawelkgkypkiledekvgeeakklfkdAqamLkkiieekllkakavvglfpansvg.ddievyadesrseelatlhtLrq 95
l++lv+ idWtpff+awel+g+yp+il+d++vg ea+klf+d++amLkkiieek+l+ak+v+glfpan+vg ddie+y+de+r+e+ t h+Lr
VIMSS200213 954 LTDLVDRIDWTPFFRAWELHGHYPEILSDKVVGVEAQKLFSDGKAMLKKIIEEKWLTAKGVIGLFPANTVGfDDIELYTDETRTEVELTTHHLRM 1048
899*******************************************************************99*********************** PP
Met_synt_B12 96 qaekeegepnlclaDfvapkesgvkDyiGlfavtaglgieelakefeaeeDdYsailvkalaDrLaeAfaellhekvrkelWgyakdeklsneel 190
q e+ g++n+claDfvapk+sgv+Dy+G+favtag+gi+e++++fea++DdY+ai++k laDrLaeAfae++he+vrke+Wgya+de+l+ne+l
VIMSS200213 1049 QLER-VGNDNFCLADFVAPKDSGVADYMGGFAVTAGHGIDEHVARFEANHDDYNAIMLKCLADRLAEAFAERMHERVRKEFWGYAADEQLDNEAL 1142
*997.799*************************************************************************************** PP
Met_synt_B12 191 ikekYqGiRpApGYpacpdhsekktlfelldaeekigieLteslamtPaasvsGlyfahpeskyFavgkiekdqvedyakrkg 273
i+ekY+GiRpApGYpacpdh+ek l+ell+ +e+i++++tes+am P+a+vsG+yfahp+s+yF+v +i++dqvedyakrkg
VIMSS200213 1143 IREKYKGIRPAPGYPACPDHTEKGLLWELLKPNETIDLNITESYAMFPTAAVSGWYFAHPKSRYFGVSNIGRDQVEDYAKRKG 1225
*********************************************************************************97 PP
Or compare VIMSS200213 to CDD or PaperBLAST