VIMSS200213 has 1244 amino acids
Query: Met_synt_B12 [M=273]
Accession: PF02965.21
Description: Vitamin B12 dependent methionine synthase, activation domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
9.3e-133 427.8 0.0 1.5e-132 427.2 0.0 1.3 1 VIMSS200213
Domain annotation for each sequence (and alignments):
>> VIMSS200213
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 427.2 0.0 1.5e-132 1.5e-132 2 273 .] 954 1225 .. 953 1225 .. 0.99
Alignments for each domain:
== domain 1 score: 427.2 bits; conditional E-value: 1.5e-132
Met_synt_B12 2 leelveyidWtpffqaWelkgkypkiledekvgeeakklfkdAqamLkkiieekllkakavvglfpAnseg.ddievyadesrseelatlhtLrq 95
l++lv+ idWtpff+aWel+g+yp+il+d++vg ea+klf+d++amLkkiieek+l+ak+v+glfpAn++g ddie+y+de+r+e+ t h+Lr
VIMSS200213 954 LTDLVDRIDWTPFFRAWELHGHYPEILSDKVVGVEAQKLFSDGKAMLKKIIEEKWLTAKGVIGLFPANTVGfDDIELYTDETRTEVELTTHHLRM 1048
899*******************************************************************99*********************** PP
Met_synt_B12 96 qaekeegkpnlclaDfvapkesgvkDyiGlFavtaglgieelakefeaekddYsailvkaladrLaeAfaellhekvrkelWgyakdeklsneel 190
q e+ g++n+claDfvapk+sgv+Dy+G+Favtag+gi+e++++fea++ddY+ai++k ladrLaeAfae++he+vrke+Wgya+de+l+ne+l
VIMSS200213 1049 QLER-VGNDNFCLADFVAPKDSGVADYMGGFAVTAGHGIDEHVARFEANHDDYNAIMLKCLADRLAEAFAERMHERVRKEFWGYAADEQLDNEAL 1142
*987.799*************************************************************************************** PP
Met_synt_B12 191 ikekYqgiRpApGYpacpdhtekktlfelldaeekigieLteslamtPaasvsGlyfahpearyFavgkiekdqvedyakrkg 273
i+ekY+giRpApGYpacpdhtek l+ell+ +e+i++++tes+am P+a+vsG+yfahp++ryF+v +i++dqvedyakrkg
VIMSS200213 1143 IREKYKGIRPAPGYPACPDHTEKGLLWELLKPNETIDLNITESYAMFPTAAVSGWYFAHPKSRYFGVSNIGRDQVEDYAKRKG 1225
*********************************************************************************97 PP
Or compare VIMSS200213 to CDD or PaperBLAST