VIMSS200253 has 197 amino acids
Query: UPF0016 [M=75]
Accession: PF01169.23
Description: Uncharacterized protein family UPF0016
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.9e-47 144.5 18.8 3.1e-28 84.3 5.6 2.1 2 VIMSS200253
Domain annotation for each sequence (and alignments):
>> VIMSS200253
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 66.5 5.2 1.1e-22 1.1e-22 2 75 .] 19 93 .. 18 93 .. 0.97
2 ! 84.3 5.6 3.1e-28 3.1e-28 2 75 .] 117 191 .. 116 191 .. 0.96
Alignments for each domain:
== domain 1 score: 66.5 bits; conditional E-value: 1.1e-22
UPF0016 2 tsflliflaElGDkTqlatiaLAary.kplaVflGatlAlalatllavllGsllakrlperlvklvaavlFlvfG 75
+s++++++aE+GDkTql++++LAar+ + a++lG++l ++++++ a++lG++ +++++++ ++++a++F++++
VIMSS200253 19 ASTFTVAIAEIGDKTQLLALLLAARFkNKTAIILGIFLSTLFNHFAAAWLGQWAINWVNPDVARYLVAASFFAIA 93
7899**********************99999*****************************************986 PP
== domain 2 score: 84.3 bits; conditional E-value: 3.1e-28
UPF0016 2 tsflliflaElGDkTqlatiaLAary.kplaVflGatlAlalatllavllGsllakrlperlvklvaavlFlvfG 75
++f+l+f+aE+GDkTq+at++L+a+y + +V++G+t++++la+++ v++G++ a++lp++++++ a+lF+++G
VIMSS200253 117 ATFILFFIAEMGDKTQIATVVLSAKYdALAMVVAGTTIGMLLANVPVVIAGHFSAEKLPMKWIHRGCAILFALLG 191
79************************66666*****************************************998 PP
Or compare VIMSS200253 to CDD or PaperBLAST