VIMSS200571 has 399 amino acids
Query: DUF418 [M=163]
Accession: PF04235.16
Description: Protein of unknown function (DUF418)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.6e-41 127.0 7.7 3.6e-41 127.0 7.7 3.1 4 VIMSS200571
Domain annotation for each sequence (and alignments):
>> VIMSS200571
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -0.8 0.2 0.071 0.071 33 75 .. 44 85 .. 22 103 .. 0.62
2 ? -1.4 0.1 0.11 0.11 16 33 .. 110 127 .. 94 166 .. 0.65
3 ? -0.3 0.3 0.051 0.051 14 47 .. 153 186 .. 143 229 .. 0.46
4 ! 127.0 7.7 3.6e-41 3.6e-41 1 162 [. 233 385 .. 233 386 .. 0.91
Alignments for each domain:
== domain 1 score: -0.8 bits; conditional E-value: 0.071
DUF418 33 lllallaelaeesallslllevlsmlgglalalgYvalillll 75
++ ++ + ++ l+ ++l+ ++++++ +++l+ +l+
VIMSS200571 44 FMG-ISFYGYAPHQIPLLWDQILQTFSNFFIEGRFISLFSMLF 85
333.355555566666667777777777777777777776665 PP
== domain 2 score: -1.4 bits; conditional E-value: 0.11
DUF418 16 llrrllliglavglplal 33
+l++l+++gl+ g++++
VIMSS200571 110 RLKWLIIFGLIHGILIWS 127
445555555555554443 PP
== domain 3 score: -0.3 bits; conditional E-value: 0.051
DUF418 14 krllrrllliglavglplallla...llaelaeesal 47
kr+ ++ ++++l+++++lal + + + e++++
VIMSS200571 153 KRKANIFIFMSLVITCLLALSGSdelF---TRESAFF 186
555555555555555555555552211...1111122 PP
== domain 4 score: 127.0 bits; conditional E-value: 3.6e-41
DUF418 1 lgrkgllkdgeehkrllrrllliglavglplalllallaelaeesallslllevlsmlgglalalgYvalillllkkekrrrllrplaavGRmALTnY 98
l+r+g++++g ++++ll+ +l+ +++ ++ + l l ++++l++++ ++ ml+++ +al+Y+++++ +++++++ +l+pl++vG++A++ Y
VIMSS200571 233 LYRQGIFEQGFNRNTLLKLALASLVLSTMDTLLGLT-------QNPMLVMFSDIIVMLSAIPMALIYIHILVSICQNRST--VLKPLQNVGKLAFSLY 321
69******7777777776666665555555555555.......**********************************888..99************** PP
DUF418 99 llqsivctllfygyglglfgslgrlallllallifllqlllSklwlrrfrqGPlEwlwRkltyg 162
+lqsiv++l+f++++ +l sl+r+ ++++al++ ++qlll++l+lr+f+qGPlE+lwR+l+++
VIMSS200571 322 ILQSIVGVLVFRHLAPELLLSLDRWGYMAIALVYSVVQLLLASLYLRYFKQGPLEKLWRHLAFK 385
************************************************************9976 PP
Or compare VIMSS200571 to CDD or PaperBLAST