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Align VIMSS202853 to PF03994 (DUF350)

VIMSS202853 has 299 amino acids

Query:       DUF350  [M=133]
Accession:   PF03994.20
Description: Domain of Unknown Function (DUF350)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    2.5e-43  133.6  32.5    1.5e-27   82.5  10.3    2.1  2  VIMSS202853  


Domain annotation for each sequence (and alignments):
>> VIMSS202853  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   82.5  10.3   1.5e-27   1.5e-27       9     133 .]      17     147 ..       8     147 .. 0.90
   2 !   57.2  14.1   9.4e-20   9.4e-20       3     133 .]     155     298 ..     152     298 .. 0.83

  Alignments for each domain:
  == domain 1  score: 82.5 bits;  conditional E-value: 1.5e-27
       DUF350   9 flvyflvglvllvlgllvydlltpydereli.regNvAaaislagallglalilaaaisgsvs......lldfllwgliglvllllafllvdklllpl 99 
                  +++ + ++++ll l++++  + ++++  +++ +++N A++is+aga+ +l+++l++ai+g++       ++ +  +gl+gl+l+ l+++l+dk++l+ 
  VIMSS202853  17 LAIDLTIAVILLTLMRYLQGWSIRVNSSKELaERDNFAFGISTAGAVAALGIVLTGAITGAAApsylteAIGMSAYGLFGLILIKLGRFLHDKIALN- 113
                  4566889*****************88666661666************************98888898889999999********************8. PP

       DUF350 100 kldlkeeieegnvaaalvlagvsiavgliiaaal 133
                  +ld +++i +gnv++a+v a+v+ia+++ii a+l
  VIMSS202853 114 ELDKNQQIIKGNVSVAIVDASVAIATAIIIRAVL 147
                  899***************************9985 PP

  == domain 2  score: 57.2 bits;  conditional E-value: 9.4e-20
       DUF350   3 legllaflvyflvglvllvlgllvydllt..pyd...ereliregNvAaaislagallglalilaaaisg........svslldfllwgliglvllll 87 
                  +++++a+++ f++++++lvl + + ++    + +    ++ +++g +A+ai  ag+++++al + aa +          ++++  l++++i lv+l l
  VIMSS202853 155 IDTFIAIFSAFAISQLMLVLLTRLREKRFasRNQdssMQQALAQGHTAVAIRHAGFMIAMALSFNAASHFilfnptayVTNIIGWLVFSIIMLVVLTL 252
                  578899***************999555442222235488889*************************9445554433245588888889999999999 PP

       DUF350  88 afllvdklllplkldlkeei.eegnvaaalvlagvsiavgliiaaal 133
                  ++++++kl+l+ +++l +e+ ++ n+++a+v++++sia++li++a +
  VIMSS202853 253 LLFVIKKLVLA-RINLADEVeRQHNIGIAAVEMAISIAIALILTALM 298
                  99999*****7.7*******777********************9976 PP



Or compare VIMSS202853 to CDD or PaperBLAST