VIMSS202853 has 299 amino acids
Query: DUF350 [M=54]
Accession: PF03994.18
Description: Domain of Unknown Function (DUF350)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.2e-27 82.0 29.8 3.4e-15 42.2 0.8 4.4 4 VIMSS202853
Domain annotation for each sequence (and alignments):
>> VIMSS202853
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 23.7 1.5 2e-09 2e-09 4 54 .] 23 74 .. 21 74 .. 0.97
2 ! 42.2 0.8 3.4e-15 3.4e-15 1 54 [] 92 147 .. 92 147 .. 0.98
3 ! 9.6 0.6 5.3e-05 5.3e-05 25 48 .. 193 216 .. 190 221 .. 0.86
4 ! 21.9 6.4 7.4e-09 7.4e-09 6 52 .. 247 296 .. 239 298 .. 0.82
Alignments for each domain:
== domain 1 score: 23.7 bits; conditional E-value: 2e-09
DUF350 4 vGivllllgflvvdlltpgklreeIkegnn.AaaivlagasiavgliiaaaI 54
++++ll l ++ + ++++ ++e+ e n A +i +aga+ a+g+++ +aI
VIMSS202853 23 IAVILLTLMRYLQGWSIRVNSSKELAERDNfAFGISTAGAVAALGIVLTGAI 74
89***********************************************998 PP
== domain 2 score: 42.2 bits; conditional E-value: 3.4e-15
DUF350 1 YgvvGivllllgflvvdllt.p.gklreeIkegnnAaaivlagasiavgliiaaaI 54
Yg++G++l+ lg +++d++ + +++I +gn+++aiv a++ ia+++ii+a +
VIMSS202853 92 YGLFGLILIKLGRFLHDKIAlNeLDKNQQIIKGNVSVAIVDASVAIATAIIIRAVL 147
9****************************************************975 PP
== domain 3 score: 9.6 bits; conditional E-value: 5.3e-05
DUF350 25 reeIkegnnAaaivlagasiavgl 48
++ + +g+ A+ai ag +ia++l
VIMSS202853 193 QQALAQGHTAVAIRHAGFMIAMAL 216
67889******************8 PP
== domain 4 score: 21.9 bits; conditional E-value: 7.4e-09
DUF350 6 ivllllgflvvdllt.p.gklreeIkegnn.Aaaivlagasiavgliiaa 52
+v+l l ++v+ +l+ ++l +e+++ +n a v +++sia++li+ a
VIMSS202853 247 LVVLTLLLFVIKKLVlArINLADEVERQHNiGIAAVEMAISIAIALILTA 296
566666666666666655*****************************987 PP
Or compare VIMSS202853 to CDD or PaperBLAST